Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1167 ATGGAGACTCGCGCCTCAAAGAAAAGAGCCAACACCATTCAACCACCATTGGTAATGGTTCCCAAAAGGCAGAGGGTTGTATTGAGTGAAATTCCAGATCTCAATGTTCATAACAATTCAGCCACAACCCTTGATTCCAATTTCAATAAACCTGTTCATAACAAAATCAATGTCAAACGTGACAATCAACAGATTATTATTCAGCCTTATGTATCTGATATCTCCGAATATCTTCGGACAATGGAGATGCAGAAAAAGAGAAGACCAATGGTTGGTTATATGGAGAACATTCAAAGGGGCATTACATCAAACATGAGGGGGACATTGGTTGATTGGTTAGTTGAGGTTGCAGATGAATACACGCTTCTCCCAGAAACCCTTCATCTATCTATTTCATACATTGATAGGTTCCTATCTATTCAACCTATCACAAGATCCAAACTTCAATTGCTTGGTGTTTCATCCATGCTCATTGCATCGAAGTATGAAGAAATCACCCCACCAAAGGCCATAGATTTCTGCCAAATCACTGATAACACCTATGATCTTGACGAGGTTTTAAATATGGAAGCTGACATACTCAAGTCTCTAAATTTTGAAATGGGCAGCCCTAATGTCATCACATTTCTAAAGAGTTTTGTTGGGATTGCTTCTGAGAATCGAAAGACTTCTAATTTGCAGTTTGAATATCTGTGCAATTATCTTGCCGAGTTAAGCTTGTTGGACTATGAGTGTATAAGATTTTTGCCTTCTGTTGTGGCTGCATCTGTTATATTTCTTGCTAGATTTATTATCCGGCCTGGAGTACATCCTTGGACATCATCCCTTTGTGAATGCTTGGGTTACAAGGCGGCTGAATTGGAAGAATGTGTTCTCATTCTACATGACTTGTATTTGTCTAGAAGGGCAGCATCCTTGAAAGCTCTTCGGGAGAAATACAAGCAGCAGAAGTTCAAATATGTGGCAAACCTGCCTACCCAGCCAGAGATACCAAATCATTACTTCAAAGAAGATTGA 1017 0.3953 METRASKKRANTIQPPLVMVPKRQRVVLSEIPDLNVHNNSATTLDSNFNKPVHNKINVKRDNQQIIIQPYVSDISEYLRTMEMQKKRRPMVGYMENIQRGITSNMRGTLVDWLVEVADEYTLLPETLHLSISYIDRFLSIQPITRSKLQLLGVSSMLIASKYEEITPPKAIDFCQITDNTYDLDEVLNMEADILKSLNFEMGSPNVITFLKSFVGIASENRKTSNLQFEYLCNYLAELSLLDYECIRFLPSVVAASVIFLARFIIRPGVHPWTSSLCECLGYKAAELEECVLILHDLYLSRRAASLKALREKYKQQKFKYVANLPTQPEIPNHYFKED* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1167 338 SMART Cyclin_C_2 204 327 IPR004367 -
Mal2g1167 338 PANTHER CYCLIN-A3-1-RELATED 39 336 - -
Mal2g1167 338 Pfam Cyclin, N-terminal domain 73 201 IPR006671 -
Mal2g1167 338 PANTHER CYCLINS 39 336 IPR039361 -
Mal2g1167 338 PIRSF Cyclin_A_B_D_E 2 336 IPR039361 -
Mal2g1167 338 SUPERFAMILY Cyclin-like 65 201 IPR036915 -
Mal2g1167 338 SUPERFAMILY Cyclin-like 204 328 IPR036915 -
Mal2g1167 338 CDD CYCLIN 105 194 IPR013763 -
Mal2g1167 338 SMART cyclin_7 111 195 IPR013763 -
Mal2g1167 338 SMART cyclin_7 208 296 IPR013763 -
Mal2g1167 338 CDD CYCLIN 204 295 IPR013763 -
Mal2g1167 338 Gene3D - 87 202 - -
Mal2g1167 338 Gene3D - 73 323 - -
Mal2g1167 338 Pfam Cyclin, C-terminal domain 204 326 IPR004367 -
Mal2g1167 338 ProSitePatterns Cyclins signature. 106 137 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1167 Mal-Chr2 13707673 13709422 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1167 3 337 Core Cell Cycle Gene Families AT5G43080 51.453 1.17e-120 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1167 K06627 - gmx:547779 411.379