Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1165 ATGGAGGCCGTTAGTTCTATGAATGACCTATGGCTATGGGATTGCTTATCTGACATAGGTGATGACAAACCTAACAAAGCCTTTCCTTCACTTAATCCATTGGACCAGCTGGATCATCCCAACCATTCATTTTCTGAGTTTGCAGAAGAGGAGCTTGAATGGATATCCAACAAAGATGCATTTCCAGCTGTTGAAACATTTGTTGACTTGTCTTGTATTCAACCGGATATTTCGAAATATCAAAAGATAGCACCAATGCTCGAGAACAGCACAAGCAGTAGCAACATCAATAACAGTTCCAACAGCATTACCCTCTTAAGTGGCTACAATCACATGAAGTTCCCTGTCCGTGCACGGAGCAAGTCTCGTAGTAAACCTCGCCTTGGCATTTCTGACACCTGGAAACATCAATTCACGAAATGTCATCATTGTGGAGCGGATAACACTCCGCAATGGCGGTCAGGTCCCAATGGTCCAAAAACACTTTGTAATGCATGTGGGGTTAGACATAGATCTGGCAGACTTGTACCTGAATACCGCCCTGCAAATAGCCCAACTTTTTGCAGCGACGTGCATTCTAATTCCCACAGGAAAGTAGTGGAAATGAGGAAGCAGAAGGGAATGGGAATGAGTTGA 636 0.4403 MEAVSSMNDLWLWDCLSDIGDDKPNKAFPSLNPLDQLDHPNHSFSEFAEEELEWISNKDAFPAVETFVDLSCIQPDISKYQKIAPMLENSTSSSNINNSSNSITLLSGYNHMKFPVRARSKSRSKPRLGISDTWKHQFTKCHHCGADNTPQWRSGPNGPKTLCNACGVRHRSGRLVPEYRPANSPTFCSDVHSNSHRKVVEMRKQKGMGMS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1165 211 Gene3D - 132 206 IPR013088 GO:0006355|GO:0008270
Mal2g1165 211 PANTHER GATA TRANSCRIPTION FACTOR 1 43 206 - -
Mal2g1165 211 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 137 198 - -
Mal2g1165 211 PANTHER GATA TRANSCRIPTION FACTOR 43 206 - -
Mal2g1165 211 CDD ZnF_GATA 140 187 IPR000679 GO:0006355|GO:0043565
Mal2g1165 211 SMART GATA_3 135 185 IPR000679 GO:0006355|GO:0043565
Mal2g1165 211 ProSiteProfiles GATA-type zinc finger domain profile. 135 171 IPR000679 GO:0006355|GO:0043565
Mal2g1165 211 Pfam GATA zinc finger 141 174 IPR000679 GO:0006355|GO:0043565
Mal2g1165 211 ProSitePatterns GATA-type zinc finger domain. 141 166 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1165 Mal-Chr2 13689033 13690110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1165 39 205 C2C2-Gata Transcription Factor Family AT3G24050 39.819 2.66e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal2g1165 GATA 7.6e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1165 - - mtr:MTR_5g007600 305.064