Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1162 ATGGAGACTCGCGCCTCAAAGAAAAGATCAAACACCATTCAACAAACACCACAAGTCATTGTTCCCAAAAGACAGAGGGTTGTTTTGAGTGAAATTCCTGATCTCAACGTTCCTGAATATCAACCTAGACAGAAACTCCAATGTCGTAAAAACCCTAACCTCAACAAATCAGCCACAATCCTTCCTTCCGTTGATTCCAATTTGGATAAGCCGGTTCATACCAAAACCAATGTCAAACGTGACAATCAACAGATTATTCTGCCTTATTTATCCGATATCTCTGAATATCTTCGCACAATGGAGATGCAGAAAAAGAGAAGACCAATGGGTGATTATATGGAGAATGTTCAAAGAGGAATTACATCAAACATGAGGGGGACATTGGTTGATTGGTTAGTTGAGGTTGCAGATGAATACAAGCTTCTACCTGAAACCCTTCATCTATCTATTTCATATATCGACAGATTCCTGTCTATTGAACCTGTCAACAGATCCAAACTTCAGTTGCTTGGTGTTTCCTCCATGCTCATTGCATCGAAGTACGAAGAAATCACCCCACCAAAGGCGGTGGATTTCTGCCAAATTACTGATAACACCTATGACCTGGAAGAGGTATTAAAGATGGAAGCTGACATACTTAAGTCCCTAAATTTTGAAATGGGCAACCCTAATGTCATAACGTTTCTAAAGAGGTTTATTGGGATTGCTTCTGAGAATCGAAAGAATTCCAATTTGCAGTTTGAATATCTGTGCAACTATCTTGCTGATTTAAGCTTGTTGGACTATGAGTGTATAAGATTCTTGCCTTCTGTTGTGGCTGCATCAGTTATATTTCTTGCCAGATTTATCATCCGGCCAGGAGTACATCCTTGGACTCCGTCCCTGTGTGAGAGCTTGGGTTATGAATCTGCTGATTTGGAAGAATGTGTCATCATTTTACATGATTTGTATTTGTCAAGAAGGGCAACATCCTTCAAAGCTGTTCGTGACAAATACAAGCAGAGCAAGTTCAAATATGTGGCAAACCTGCCGTCCCCACCGGAGATACCGAATCATTACTTTGAAGAAGAGTGA 1074 0.4041 METRASKKRSNTIQQTPQVIVPKRQRVVLSEIPDLNVPEYQPRQKLQCRKNPNLNKSATILPSVDSNLDKPVHTKTNVKRDNQQIILPYLSDISEYLRTMEMQKKRRPMGDYMENVQRGITSNMRGTLVDWLVEVADEYKLLPETLHLSISYIDRFLSIEPVNRSKLQLLGVSSMLIASKYEEITPPKAVDFCQITDNTYDLEEVLKMEADILKSLNFEMGNPNVITFLKRFIGIASENRKNSNLQFEYLCNYLADLSLLDYECIRFLPSVVAASVIFLARFIIRPGVHPWTPSLCESLGYESADLEECVIILHDLYLSRRATSFKAVRDKYKQSKFKYVANLPSPPEIPNHYFEEE* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1162 357 Gene3D - 92 342 - -
Mal2g1162 357 Pfam Cyclin, N-terminal domain 92 220 IPR006671 -
Mal2g1162 357 ProSitePatterns Cyclins signature. 125 156 IPR006671 -
Mal2g1162 357 CDD CYCLIN 124 213 IPR013763 -
Mal2g1162 357 Pfam Cyclin, C-terminal domain 223 345 IPR004367 -
Mal2g1162 357 SUPERFAMILY Cyclin-like 223 348 IPR036915 -
Mal2g1162 357 CDD CYCLIN 223 314 IPR013763 -
Mal2g1162 357 PANTHER CYCLIN-A3-1-RELATED 19 356 - -
Mal2g1162 357 SUPERFAMILY Cyclin-like 81 220 IPR036915 -
Mal2g1162 357 Gene3D - 106 221 - -
Mal2g1162 357 PANTHER CYCLINS 19 356 IPR039361 -
Mal2g1162 357 PIRSF Cyclin_A_B_D_E 1 354 IPR039361 -
Mal2g1162 357 SMART Cyclin_C_2 223 346 IPR004367 -
Mal2g1162 357 SMART cyclin_7 130 214 IPR013763 -
Mal2g1162 357 SMART cyclin_7 227 315 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1162 Mal-Chr2 13636548 13638741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1162 3 356 Core Cell Cycle Gene Families AT5G43080 50.704 4.16e-124 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1162 K06627 - gmx:100786875 437.958