Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1161 ATGGAGACTCGTGCTTCAAGGAAGAGGGCTAATGCTGAACCAATTGTTCTTAACAACAAAAAACAAAGGGTTGTTTTGGGTGAACTTTCAAATCTACCCAATGTCACTGTTTCTGATAATCAATCCTTTGAAAAACCTCAAACTCGGAAGAATCTAAGGCAAAAGAAGTCAGATGCTGTTTATTTGTTTCCTGGTTTTCCTAGATTTGATTTGGATAAGCCAGATTTCAGTAACAACAATGCAAAATCTGAATATCAACAAATTAGTGAGCCTTATGCATCTGACATATCCAATTATCTTCGCTCAATGGAGATTCAGAAAAAGAGAAGACCAATGGTTGGTTATATTGAGAAAGTTCAGAGAGGTGTTACTTCAAGTATGAGAGGAATATTGGTGGATTGGCTAGTTGAAGTTGCAGAAGAATACAAACTTCTTCCTCAAACCCTTCATCTCTCTGTTTCATACATTGATAGGTTTCTATCTCTTCACACTGTGAACAGATCTAACCTTCAGTTGCTTGGTGTTTCCTCAATGCTCATTGCATCAAAGTATGAAGAAATTACCCCACCAAAGGCGGTAGATTTTCGCCACATTACTGATAACACCTATGAGCTGAAACAGGTTATAAAGATGGAGGCTGAGATACTTAAGTCACTACATTTTGAAATGGGCAACCCTCATGCTAACACATTTCTAAAGGAGTTTATTGGGTTTGCTACTGAAGATCAAAAGACTTCAAAATTGCAAATGGAATTTCTATGTAACTATCTTGCTGAGCTAAGCTTGTTAGACTATGAATGTATAAGATTCTTGCCTTCTATGGTGGCTGCATCTGTTATATTTCTTGCCAGATTTATTATCTGTCCTGGAGTACATCCTTGGACTTCATCATTGAGTGAATGCTTGGGTTATAAATCTGCTGAGTTGGAAGAATGTGTTCTTATTTTACATGATTTGTATTTGGTAAGAAAAGCAGCATCATTGAAAGCTGTTAGGGAGAAATACAAGCAACACAAGTTCAAAAATGTGGCAAACCTACCTTCACCACCAGAGGTACCAAATCATTACTTTGAAGAGGAGTGA 1083 0.3721 METRASRKRANAEPIVLNNKKQRVVLGELSNLPNVTVSDNQSFEKPQTRKNLRQKKSDAVYLFPGFPRFDLDKPDFSNNNAKSEYQQISEPYASDISNYLRSMEIQKKRRPMVGYIEKVQRGVTSSMRGILVDWLVEVAEEYKLLPQTLHLSVSYIDRFLSLHTVNRSNLQLLGVSSMLIASKYEEITPPKAVDFRHITDNTYELKQVIKMEAEILKSLHFEMGNPHANTFLKEFIGFATEDQKTSKLQMEFLCNYLAELSLLDYECIRFLPSMVAASVIFLARFIICPGVHPWTSSLSECLGYKSAELEECVLILHDLYLVRKAASLKAVREKYKQHKFKNVANLPSPPEVPNHYFEEE* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1161 360 SUPERFAMILY Cyclin-like 226 350 IPR036915 -
Mal2g1161 360 CDD CYCLIN 127 216 IPR013763 -
Mal2g1161 360 PANTHER CYCLIN-A3-1-RELATED 16 359 - -
Mal2g1161 360 SUPERFAMILY Cyclin-like 87 223 IPR036915 -
Mal2g1161 360 SMART Cyclin_C_2 226 349 IPR004367 -
Mal2g1161 360 CDD CYCLIN 226 317 IPR013763 -
Mal2g1161 360 Pfam Cyclin, N-terminal domain 95 223 IPR006671 -
Mal2g1161 360 PANTHER CYCLINS 16 359 IPR039361 -
Mal2g1161 360 Gene3D - 95 345 - -
Mal2g1161 360 Pfam Cyclin, C-terminal domain 228 348 IPR004367 -
Mal2g1161 360 Gene3D - 109 224 - -
Mal2g1161 360 SMART cyclin_7 133 217 IPR013763 -
Mal2g1161 360 SMART cyclin_7 233 318 IPR013763 -
Mal2g1161 360 ProSitePatterns Cyclins signature. 128 159 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1161 Mal-Chr2 13630667 13632483 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1161 3 359 Core Cell Cycle Gene Families AT5G43080 53.333 4.67e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1161 K06627 - gmx:100787417 432.95