Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1157 ATGGATGATGATTCCCGTGACAGGTTTCCCATTGGAATGCGTGTTCTTGCCGTCGACGGCGATCCAACATCTCTCTTGCATTTAGAAACTCAACTCCGAACATGTCAATACCACGTAACAACAACTAGTCAAGCAAAAACGGCGTTGACTATGTTGCGAGAAAACAAAGACAAGTTTGACCTGGTAATCGCTGATGTGCACATGCCTGACATGGATGGACTTAAGCTGCTTGAACTTGTGGGACTTGAGATGGACCTTCCTGAGTTTCCTGTCATATTGTTGTCTGAATATAGTGATACAGAGCTGGTGATGAAGGCAATTTCCCATGGTGCCTGTGATTTTCTGGTGAAACCTGTGAGATTAGAGGAGCTAAAGATCATTTGGCAGCATGTACTTCGGAAGAAGTTCGAGGACCTGTCAGCTCTGAAGAAGTCCCAGTTTGTTTGGTCTGTGGAGCTACACCGCAAGTTTGTGTCTGCTGTTACTCAGTTAGGCTTTGACAAGGCTGTACCCAAAAAGATTCTTGATTTGATGAATGTTGAAAATATTACAAGGGAGGACGTAGCGAGCCATCTCGAGAAGTATAGACTTTATATGAAAAAAATTAGCTCTGTGGAATACCAACAAGCTAGTATGGTGGCAGCCTTAGGGAGTGCAGATCAAGATGAAGACAGCGATGAGGATGAAGAGAATGGTTGCGACAATGAGGACCCATCAGCTTAG 723 0.444 MDDDSRDRFPIGMRVLAVDGDPTSLLHLETQLRTCQYHVTTTSQAKTALTMLRENKDKFDLVIADVHMPDMDGLKLLELVGLEMDLPEFPVILLSEYSDTELVMKAISHGACDFLVKPVRLEELKIIWQHVLRKKFEDLSALKKSQFVWSVELHRKFVSAVTQLGFDKAVPKKILDLMNVENITREDVASHLEKYRLYMKKISSVEYQQASMVAALGSADQDEDSDEDEENGCDNEDPSA* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1157 240 Gene3D - 12 143 - -
Mal2g1157 240 PIRSF RR_ARR_type-B 1 141 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mal2g1157 240 PIRSF RR_ARR_type-B 136 238 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mal2g1157 240 PANTHER TWO-COMPONENT RESPONSE REGULATOR 137 210 IPR045279 GO:0009736
Mal2g1157 240 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 135 IPR045279 GO:0009736
Mal2g1157 240 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 137 210 - -
Mal2g1157 240 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 4 135 - -
Mal2g1157 240 SUPERFAMILY Homeodomain-like 142 201 IPR009057 -
Mal2g1157 240 SMART REC_2 13 128 IPR001789 GO:0000160
Mal2g1157 240 MobiDBLite consensus disorder prediction 220 240 - -
Mal2g1157 240 Pfam Response regulator receiver domain 15 125 IPR001789 GO:0000160
Mal2g1157 240 Gene3D - 144 203 - -
Mal2g1157 240 Pfam Myb-like DNA-binding domain 149 196 IPR001005 -
Mal2g1157 240 SUPERFAMILY CheY-like 12 137 IPR011006 -
Mal2g1157 240 MobiDBLite consensus disorder prediction 216 240 - -
Mal2g1157 240 ProSiteProfiles Response regulatory domain profile. 14 132 IPR001789 GO:0000160
Mal2g1157 240 CDD REC_typeB_ARR-like 15 132 - -
Mal2g1157 240 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 144 197 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1157 Mal-Chr2 13581731 13583660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1157 7 215 Response Regulator Gene Family AT2G25180 54.826 1.98e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mal2g1157 Response_reg 1.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1157 - K14491 mtr:MTR_3g102590 335.109