Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal2g1157 | ATGGATGATGATTCCCGTGACAGGTTTCCCATTGGAATGCGTGTTCTTGCCGTCGACGGCGATCCAACATCTCTCTTGCATTTAGAAACTCAACTCCGAACATGTCAATACCACGTAACAACAACTAGTCAAGCAAAAACGGCGTTGACTATGTTGCGAGAAAACAAAGACAAGTTTGACCTGGTAATCGCTGATGTGCACATGCCTGACATGGATGGACTTAAGCTGCTTGAACTTGTGGGACTTGAGATGGACCTTCCTGAGTTTCCTGTCATATTGTTGTCTGAATATAGTGATACAGAGCTGGTGATGAAGGCAATTTCCCATGGTGCCTGTGATTTTCTGGTGAAACCTGTGAGATTAGAGGAGCTAAAGATCATTTGGCAGCATGTACTTCGGAAGAAGTTCGAGGACCTGTCAGCTCTGAAGAAGTCCCAGTTTGTTTGGTCTGTGGAGCTACACCGCAAGTTTGTGTCTGCTGTTACTCAGTTAGGCTTTGACAAGGCTGTACCCAAAAAGATTCTTGATTTGATGAATGTTGAAAATATTACAAGGGAGGACGTAGCGAGCCATCTCGAGAAGTATAGACTTTATATGAAAAAAATTAGCTCTGTGGAATACCAACAAGCTAGTATGGTGGCAGCCTTAGGGAGTGCAGATCAAGATGAAGACAGCGATGAGGATGAAGAGAATGGTTGCGACAATGAGGACCCATCAGCTTAG | 723 | 0.444 | MDDDSRDRFPIGMRVLAVDGDPTSLLHLETQLRTCQYHVTTTSQAKTALTMLRENKDKFDLVIADVHMPDMDGLKLLELVGLEMDLPEFPVILLSEYSDTELVMKAISHGACDFLVKPVRLEELKIIWQHVLRKKFEDLSALKKSQFVWSVELHRKFVSAVTQLGFDKAVPKKILDLMNVENITREDVASHLEKYRLYMKKISSVEYQQASMVAALGSADQDEDSDEDEENGCDNEDPSA* | 241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal2g1157 | 240 | Gene3D | - | 12 | 143 | - | - | |
Mal2g1157 | 240 | PIRSF | RR_ARR_type-B | 1 | 141 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Mal2g1157 | 240 | PIRSF | RR_ARR_type-B | 136 | 238 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Mal2g1157 | 240 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 137 | 210 | IPR045279 | GO:0009736 | |
Mal2g1157 | 240 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 4 | 135 | IPR045279 | GO:0009736 | |
Mal2g1157 | 240 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR10 | 137 | 210 | - | - | |
Mal2g1157 | 240 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR10 | 4 | 135 | - | - | |
Mal2g1157 | 240 | SUPERFAMILY | Homeodomain-like | 142 | 201 | IPR009057 | - | |
Mal2g1157 | 240 | SMART | REC_2 | 13 | 128 | IPR001789 | GO:0000160 | |
Mal2g1157 | 240 | MobiDBLite | consensus disorder prediction | 220 | 240 | - | - | |
Mal2g1157 | 240 | Pfam | Response regulator receiver domain | 15 | 125 | IPR001789 | GO:0000160 | |
Mal2g1157 | 240 | Gene3D | - | 144 | 203 | - | - | |
Mal2g1157 | 240 | Pfam | Myb-like DNA-binding domain | 149 | 196 | IPR001005 | - | |
Mal2g1157 | 240 | SUPERFAMILY | CheY-like | 12 | 137 | IPR011006 | - | |
Mal2g1157 | 240 | MobiDBLite | consensus disorder prediction | 216 | 240 | - | - | |
Mal2g1157 | 240 | ProSiteProfiles | Response regulatory domain profile. | 14 | 132 | IPR001789 | GO:0000160 | |
Mal2g1157 | 240 | CDD | REC_typeB_ARR-like | 15 | 132 | - | - | |
Mal2g1157 | 240 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 144 | 197 | IPR006447 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal2g1157 | Mal-Chr2 | 13581731 | 13583660 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal2g1157 | 7 | 215 | Response Regulator Gene Family | AT2G25180 | 54.826 | 1.98e-89 | 274 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-ARR-B | Mal2g1157 | Response_reg | 1.2e-21 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal2g1157 | - | K14491 | mtr:MTR_3g102590 | 335.109 |