LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g1156	ATGAGTGGTCCATCACGAGAAGAGAATTCAAAGGAAGAGGTAAAAGAAGAAGATGAAGGTAACCGGTTACTGGAAGTTGACGGTGAAGGTGAATTATCATCATCATCGGAAGAAGAAGCGGCGTATGAATCCGGCGAGAAAATCGTGGTGGTAGATTTCGAATTCGACGGCGTAGACGATTCAACCGTTCCACCTTTTTCATGGAAGAAGCTATGGATGTTCACTGGACCAGGATTCTTGATGAGTATAGCTTTTTTGGATCCAGGGAATTTGGAAGGTGATCTACAAGCAGGTGCGATTGCGGGGTATTCTTTGCTATGGTTGTTGATGTGGGCTACGTTGATGGGATTGTTGATTCAATTGCTATCGGCGAGGGTCGGTGTTGCTACTGGTCGTCATCTTGCTGAGCTTTGTAGAGATGAGTATCCGAATTGGGCGAGATATGTGCTTTGGTTTATGGCTGAACTTGCTTTGATTGGTGCTGATATTCAAGAGGTTATTGGTAGTGCTATTGCTATTCAGATTCTTAGTCATGGTGTTTTGCCTCTTTGGGCTGGTGTTCTTATCACTGCTTCTGATTGCTTTTTCTTTCTATTTCTTGAGAACTACGGAGTGAGGAAGTTGGAAGCTGCTTTCGCAGTTCTCATAGCTACCATGGCTCTTTCATTTGCCTGGATGTTTGGTGACACACAACCTAGTGGAAAAGAGCTTGTGAGGGGTATTTTGATTCCAAGACTTAGCTCAAAAACAATCCATCAGGCTGTGGGTGTTGTGGGTTGTGTCATTATGCCTCATAATGTATTTCTGCATTCTGCTTTAGTGCAGTCAAGGAAGATTGATCCGCATAAGAAAGGTCGGGTGCAAGAGGCTCTTAATTACTATAATATTGAGTCAACAGTTGCACTTTCAGTCACCTTCATGATCAATCTGTTTGTCACAACAGTTTTTGCTAAGGGTTTCTATGGTACAAAGCAGGCAAATAGCATAGGATTGGTAAATGCAGGGCAGTATCTTGAGGAAAAATATGGAGGAGGACTCTTCCCTATTCTTTATATATGGGGAATTGGGTTATTGGCGGCCGGACAAAGTAGCACTATTACGGGCACGTATGCTGGGCAATTCATAATGGGGGGTTTCCTCAACCTTCGATTAAAGAAATGGTTGAGAGCATTGATCACTCGGAGTTGTGCAATTGTGCCAACTATAATTGTAGCTATTGTTTATAACAGGTCAGAAGCCTCATTGGATGTTTTGAATGAATGGCTTAATGTGCTTCAGTCCATACAAATTCCCTTTGCATTGATTCCTCTCCTCACGTTAGTCTCCAAAGAGCGTATCATGGGGTCCTTTAAGGTTGGGCCTGTTCTTGAGAGGGTGGCATGGACGGTTGCTGCACTGATAATAGTAATTAATGGGTATCTCTTGGTAGATTTCTTCCTTTCTGAGGTGAACAGCTTATTGTTTGGTTTTGTAGCCTGCTCTTGCACAGTTGCATACATTGCATTCATTGTATATTTAATTTCACAAAGTGGTGCTCTTCCTTCTGCATTGGTGGATCGATTTCCAAAGGGATTTTCTTCTTCTGGGAATTAA	1593	0.4262	MSGPSREENSKEEVKEEDEGNRLLEVDGEGELSSSSEEEAAYESGEKIVVVDFEFDGVDDSTVPPFSWKKLWMFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCRDEYPNWARYVLWFMAELALIGADIQEVIGSAIAIQILSHGVLPLWAGVLITASDCFFFLFLENYGVRKLEAAFAVLIATMALSFAWMFGDTQPSGKELVRGILIPRLSSKTIHQAVGVVGCVIMPHNVFLHSALVQSRKIDPHKKGRVQEALNYYNIESTVALSVTFMINLFVTTVFAKGFYGTKQANSIGLVNAGQYLEEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSCAIVPTIIVAIVYNRSEASLDVLNEWLNVLQSIQIPFALIPLLTLVSKERIMGSFKVGPVLERVAWTVAALIIVINGYLLVDFFLSEVNSLLFGFVACSCTVAYIAFIVYLISQSGALPSALVDRFPKGFSSSGN*	531

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g1156	530	Pfam	Natural resistance-associated macrophage protein	92	453	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Mal2g1156	530	PANTHER	BNAC08G04640D PROTEIN	21	516	-	-
	Mal2g1156	530	PRINTS	Natural resistance-associated macrophage protein signature	180	199	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Mal2g1156	530	PRINTS	Natural resistance-associated macrophage protein signature	361	380	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Mal2g1156	530	PRINTS	Natural resistance-associated macrophage protein signature	389	406	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Mal2g1156	530	PRINTS	Natural resistance-associated macrophage protein signature	150	176	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Mal2g1156	530	PRINTS	Natural resistance-associated macrophage protein signature	254	277	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Mal2g1156	530	PRINTS	Natural resistance-associated macrophage protein signature	205	226	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Mal2g1156	530	PRINTS	Natural resistance-associated macrophage protein signature	423	442	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Mal2g1156	530	MobiDBLite	consensus disorder prediction	1	26	-	-
	Mal2g1156	530	MobiDBLite	consensus disorder prediction	1	43	-	-
	Mal2g1156	530	Hamap	Divalent metal cation transporter MntH [mntH].	58	479	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Mal2g1156	530	PANTHER	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	21	516	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Mal2g1156	530	TIGRFAM	nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family	69	447	IPR001046	GO:0016020\|GO:0030001\|GO:0046873

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g1156	Mal-Chr2	13540221	13544638	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g1156	7	510	Inorganic Solute Cotransporters	AT1G47240	80.632	0.0	833

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g1156	K21398		-	gmx:100795013	870.152

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal2g1156	2	13540221	13544638	Mal2g1156	2	13540221	13544638	ECH