Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1139 ATGATGTTAGGACTTGCTAAAATGTTTCTTTCAATTTCATATTCTTTGTTATCTTTTAAAATAATAGTGACTTATAACTACATTGTTGCAGCTGAAAATAACAATTCCTATACACGTCTTCTTATGGATCTCGAGGATTGGCTTCGCAGGAATCCTCCACCCGCACACCTCTTTTTGATATTTGGTGATGTATACTTTTCTGGAATATTGAATAAGTTAAGAATGCGTAACTACAATATCTTGCTTGCATGTCCAGAAAGGCCTCATGTTGCTCTCTGCCATGCAGCAACTATAATGTGGCAATGGTCTTCGATGCTCAAGGGGGAAGATCTTATAGGAAAACATTTCAACTATCCTCCTGATGATCCGTTTAATTCTTGGTATGGAAACTCAAATGTGCCTCTTAAAAACCCATTCTCAGTTGCTGAGCTGCACACATCATCACAAAATGCGGAGATTCACAAACCTTCCTCGGACATAAAGGTAGGTGAAGCTTCAAAGTCAGTTTCTAGGCAGGTCATGAAGATATTGAGTTCGCACCCAAAAGGGATCTCCATTGGAGACCTTCGTGCAAAATTGACAAAGTGTGATCCACCTTTGGGTAAACGCTTCTATGGATATAAAAAGTTTTCCAACATTTTAATATCTATACCACATGTACAACTCGAGTATTTAGGAGAAGGTAATTTTTGGGTGTGTTTGGTCTCAACAAGGACATCAACTATTAAGAACAAGCAGGAGGACACCACTACAACTCAAAAGCTACACAATGATGTTAGTCATCCTCTGCAACCTCATTGGGATAACATTAGGGTTTCAGTATGGTGGGACTTCGACAGTTGTCCCGTCCCTTCCGACGTTAGCTTTTTAAATGTAGCACCTTCAATTATGGGAGTTCTTAGAGCTAACGGGATTAAGGGCCCTATTCATATTGACGCTTATGGCGATGTTTCTCATCTTACAGAGATCCAACAAGAAGCACTTTTCTTCTCAGGCATTGATCTCCACCACATTTACGGTGGAAAGAAAAACTCTCATAAATGGCTTATGGATTGGGCTTGTCAAAATCCTCCACCCGGACACCTCTTTCTGATATCTGGTGATAGAGACTTATACTTCCGTGGCACAACGTACGAGTTATCGAATAGTGAATTCAATATATTGCTTGCATGTCCAAGAATGGATTATTTTCTTAGCCACAGTATTGCAACCATAGTGTGGCAGTGGTCTTCAATGCTCAAGGGGAAATATCTTACTGGAAAATATTGCGGTTATCCTCCTCGTTGGTATATTAAGGTCCCTTATGAATATCCTCCTGAGTGGTATAGAAACTCTAAAGTGCTTCTTGAAAACCCCTTCTCAATTGTTGAGGAGCCCACATCTTCAAAAAATGCAGAGATCCACGAACCTTCCTCGTACATAAAGTTAGTTGAAGTTCCAAAGTCACTTTGCAGGCAGGTTAGGAAGATATTGAGTTCGTACCCGAATGGGATCGCCATTGGAGATCTTCACTTACGGTTCAAATTGAGTTCTATGCACCATTTGGGTAAAGGAAATACACAAAAAGAGTTTTCCAACATTCTAGTATCTATACCACATGTACAACTCCTATATATAGGAGAAGGTGATTTTTGTGTGCGTTTAAATAAGGAGAGGGCAGTTAAAAATAAGCAGCAGGGTGTTGATCATCCAGGAATGCCTGCATTGTTTTCTAGTGGTTCCTTTTGGGATGATGTGGAATCTTTTGTTTTCACATCCAGAAGATCACGTCTTATTTCCCGGTCAATAAGCAGGTTTGCTAGTTTTGTTCTTTCTTCATAA 1821 0.3981 MMLGLAKMFLSISYSLLSFKIIVTYNYIVAAENNNSYTRLLMDLEDWLRRNPPPAHLFLIFGDVYFSGILNKLRMRNYNILLACPERPHVALCHAATIMWQWSSMLKGEDLIGKHFNYPPDDPFNSWYGNSNVPLKNPFSVAELHTSSQNAEIHKPSSDIKVGEASKSVSRQVMKILSSHPKGISIGDLRAKLTKCDPPLGKRFYGYKKFSNILISIPHVQLEYLGEGNFWVCLVSTRTSTIKNKQEDTTTTQKLHNDVSHPLQPHWDNIRVSVWWDFDSCPVPSDVSFLNVAPSIMGVLRANGIKGPIHIDAYGDVSHLTEIQQEALFFSGIDLHHIYGGKKNSHKWLMDWACQNPPPGHLFLISGDRDLYFRGTTYELSNSEFNILLACPRMDYFLSHSIATIVWQWSSMLKGKYLTGKYCGYPPRWYIKVPYEYPPEWYRNSKVLLENPFSIVEEPTSSKNAEIHEPSSYIKLVEVPKSLCRQVRKILSSYPNGIAIGDLHLRFKLSSMHHLGKGNTQKEFSNILVSIPHVQLLYIGEGDFCVRLNKERAVKNKQQGVDHPGMPALFSSGSFWDDVESFVFTSRRSRLISRSISRFASFVLSS* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1139 606 Gene3D - 164 235 IPR041966 -
Mal2g1139 606 CDD PIN_limkain_b1_N_like 23 85 - -
Mal2g1139 606 PANTHER EMB|CAB71880.1 258 558 - -
Mal2g1139 606 Pfam NYN domain 271 389 IPR021139 GO:0004540
Mal2g1139 606 ProSiteProfiles OST-type HTH domain profile. 165 236 IPR025605 -
Mal2g1139 606 PANTHER LIMKAIN B LKAP 33 257 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal2g1139 606 PANTHER LIMKAIN B LKAP 258 558 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal2g1139 606 Pfam OST-HTH/LOTUS domain 167 231 IPR025605 -
Mal2g1139 606 PANTHER EMB|CAB71880.1 33 257 - -
Mal2g1139 606 CDD PIN_limkain_b1_N_like 271 392 - -
Mal2g1139 606 CDD LOTUS 167 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1139 Mal-Chr2 13402658 13407306 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1139 271 415 C2H2 Transcription Factor Family AT5G61190 37.662 8.78e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1139 - - mtr:MTR_7g077430 415.616