Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1121 ATGGAAGGAACCTTCAATTTCAACGATAATTCATCTTCCGCTTTCAGCGATTGCGACAGTGACAGATCCGGTGAATTCACCACTCCATCTTCACAAAACCGACGACTTCTGATTACCTGCGCTTCCGATAACAACTCCGACGAACTCATCCGCCGGTTGATTCTCGATCTCCATTCCTCTTCAATTGATCAACAAAAACAAGCTACAATGGAAATCAGATTACTAGCAAAAAACAAATCAGAAAATCGTCTCAGAATCGCAAAAGCCGGCGCTATCAAACCGTTGATTTCACTTTTATCATCACCGTCGCCGGCGATGGATCTTCAACTGCAAGAGTACGTTGTTACAGCGATTTTAAATCTCTCACTGTGCGATGAAAATAAAGAGATTATCGCTTCTTCTGGAGGGATTAGGCCTATAGTGAAAGCTCTGAAGACAGGCACTCCGACGGCTAAGGAGAATGCAGCATGTGCTCTACTTCGTATCTCACAGACAGAAGAGAACAAAGGAGCAATTGGAAGATGTGGAGCAATTCCAGCATTGGTGAACCTTCTAGAAAACGGTGGTTTCCGCGGGAAAAAGGACGCATCGACGGCGCTATACTCGCTCTGTTCGGTGAAGGAGAACAAAATTAGAGCGGTGAAAGCTGGAATAATGAAGCCTTTGGTTGAATTGATGGCGGATTTGGATTCGAACATGGTGGATAAGTCGGCGTATGTGATGAGCGTGTTGGTGACGGTTATGGAAGCGAGAACGGCGTTGGTGGAGGAAGGAGGGATTCCGGTGTTGGTGGAGATTGTGGAGATTGGGACGACGAGACAGAAGGAAATAGCGGTGGTGATTTTGTTGAAGATTTGTGAAGAGAATATGAGTTATCGTTTAATGGTGTGCCGTGAAGGTGCTATTCCACCGCTGGTTTCTCTTTCTCAGTGCGGTACCATTCGCGCCAAGCACAAGGTGGAGACACTTATAGAGCTTTTACGGCAACCAAGATCTAGCAATGCCAATGTACGTGCCTCATAA 1023 0.4604 MEGTFNFNDNSSSAFSDCDSDRSGEFTTPSSQNRRLLITCASDNNSDELIRRLILDLHSSSIDQQKQATMEIRLLAKNKSENRLRIAKAGAIKPLISLLSSPSPAMDLQLQEYVVTAILNLSLCDENKEIIASSGGIRPIVKALKTGTPTAKENAACALLRISQTEENKGAIGRCGAIPALVNLLENGGFRGKKDASTALYSLCSVKENKIRAVKAGIMKPLVELMADLDSNMVDKSAYVMSVLVTVMEARTALVEEGGIPVLVEIVEIGTTRQKEIAVVILLKICEENMSYRLMVCREGAIPPLVSLSQCGTIRAKHKVETLIELLRQPRSSNANVRAS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1121 340 Gene3D - 27 191 IPR011989 -
Mal2g1121 340 SMART arm_5 165 205 IPR000225 GO:0005515
Mal2g1121 340 SMART arm_5 289 329 IPR000225 GO:0005515
Mal2g1121 340 SMART arm_5 206 246 IPR000225 GO:0005515
Mal2g1121 340 SMART arm_5 247 287 IPR000225 GO:0005515
Mal2g1121 340 SMART arm_5 79 123 IPR000225 GO:0005515
Mal2g1121 340 SMART arm_5 124 164 IPR000225 GO:0005515
Mal2g1121 340 SUPERFAMILY ARM repeat 47 332 IPR016024 -
Mal2g1121 340 PANTHER U BOX DOMAIN-CONTAINING 9 335 - -
Mal2g1121 340 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 90 136 IPR000225 GO:0005515
Mal2g1121 340 Pfam Armadillo/beta-catenin-like repeat 80 122 IPR000225 GO:0005515
Mal2g1121 340 Pfam Armadillo/beta-catenin-like repeat 125 162 IPR000225 GO:0005515
Mal2g1121 340 Pfam Armadillo/beta-catenin-like repeat 166 205 IPR000225 GO:0005515
Mal2g1121 340 Gene3D - 193 339 IPR011989 -
Mal2g1121 340 MobiDBLite consensus disorder prediction 1 29 - -
Mal2g1121 340 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 9 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1121 Mal-Chr2 13196717 13199921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1121 27 335 U-box Gene Family AT2G23140 45.631 4.19e-79 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1121 - - gmx:100797550 476.478