Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1119 ATGGAAACACTTGGAGCTATCATTGATGATGGTGAATGGGAATGCTTTCGTAGAATGCTTACCACTGAAGACCATGATGACTCACCACCACAATTACTTGATCAAACTTTGCTTCTTGGGGAAAACGGTGGAAACTTTGGAGTACAATCCATGTTTTGCTCCCCTTCTGAAGCTGAGGGAAATATGAGTACTAATGTGTTTTACTCTTTTGATTCTCACAAGAACTATAATTCACAAGAGAGTAATCATAGTACTCAAGGTCACACAAACTACTATTTTGATAGTTCTGATCATGTAATAGTTAAAAATAGTGATCGAACAGAGAATTTTGATCATAGTCAAGTCCAACCTAATGTTTCTCCCACGAAGCAGTTGAAGCTGAAAAGGATGCTTGATGTGCAAGAATTTCAAGAGAATATAGAAGATCATATAAACTCATGTGGGAATCCCCAGAAAAAACCTCGTGCTTCGAAAGATGTGCAAAGATGCATGAAAAATGCAGAGTCCAAGAAGGGCAAGAAGGTTGATAGAAATTATGAAAACAAGGCAGAAGAAGCCAATGCAAGTGTAGATGGACATACCTACAGTGGCGATACCTCGGAGGAGCACAATCTGTCCGAGGAAAATAGTGGAGGAGCTACTTCAGCATCTAAATCAACTGTGTCTCTCAACTCAAATGGGAAGAAAAGAGCTAATAGAGGATCAGCAACAGATCCTCAAAGCCTTTATGCAAGGAAAAGAAGGGAGAAAATAAACGAGAGACTAAGAACTCTACAGAATCTTGTACCAAATGGAACAAAGGTTGATATAAGCACAATGCTTGAAGATGCAATCCAATATGTGAAATTTTTGCAGCTCCAGATCAAGCTTCTAAGCTCTGATGATATGTGGATGTATGCTCCAATTGCTTATAATGGACTTGACATTGGATTCAATCTCAACAGGAAGATTTCTACACCACCATGA 966 0.3892 METLGAIIDDGEWECFRRMLTTEDHDDSPPQLLDQTLLLGENGGNFGVQSMFCSPSEAEGNMSTNVFYSFDSHKNYNSQESNHSTQGHTNYYFDSSDHVIVKNSDRTENFDHSQVQPNVSPTKQLKLKRMLDVQEFQENIEDHINSCGNPQKKPRASKDVQRCMKNAESKKGKKVDRNYENKAEEANASVDGHTYSGDTSEEHNLSEENSGGATSASKSTVSLNSNGKKRANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIQYVKFLQLQIKLLSSDDMWMYAPIAYNGLDIGFNLNRKISTPP* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1119 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 235 284 IPR011598 GO:0046983
Mal2g1119 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 234 301 IPR036638 GO:0046983
Mal2g1119 321 Gene3D - 231 292 IPR036638 GO:0046983
Mal2g1119 321 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 5 314 - -
Mal2g1119 321 Pfam Helix-loop-helix DNA-binding domain 245 285 IPR011598 GO:0046983
Mal2g1119 321 PANTHER TRANSCRIPTION FACTOR BHLH54 5 314 - -
Mal2g1119 321 MobiDBLite consensus disorder prediction 142 246 - -
Mal2g1119 321 MobiDBLite consensus disorder prediction 155 187 - -
Mal2g1119 321 SMART finulus 241 290 IPR011598 GO:0046983
Mal2g1119 321 MobiDBLite consensus disorder prediction 206 239 - -
Mal2g1119 321 CDD bHLH_AtIND_like 236 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1119 Mal-Chr2 13181095 13183515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1119 199 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 71.667 1.19e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g1119 HLH 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1119 - - mtr:MTR_3g103030 545.428