Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1114 ATGGCTATGGAAGCACTTAACTCACCCACCACCGCTACTCCTTTCACTCCCTTTGAGGAACCAAATCTGAACTACCTAGATACACCGTGGACCAAAGGTAAACGTTCAAAGCGTTCTCGCATGGATAACCACCACCATGAGGAACCTTCATGCACTGAAGAAGAGTATCTCGCTTTCTGTCTCATCATGCTCGCTCGCAGCGGCAACAACAACAACAACAACAACAAAGTTACTCTCTCCACCGCCAAACCAGTTCTCTCTGATACTGAATCAGCGCCGCTAACCGCCAAACTCAGTCACAAGTGCTCTGTTTGCGACAAAGCTTTTTCATCTTACCAAGCACTCGGAGGACACAAAGCCAGCCACCGGAAACACGCTGTTATGTCCACCGCTGAAGATCAAACCACCACCACTTCATCCGCCGTGACTACCAGCTCTGCATCCAATGGTAAGATCAAGACTCATGAGTGTTCCATCTGTCACAAATCCTTCCCTACTGGACAGGCTTTGGGAGGACACAAGCGTTGTCACTACGAAGGCAGTGTTGGTGCCGGTGCTGGTGGTGGAAACAGCACCGTAACTGCTTCTGAAGGAGTTGGATCGTCTCACAGCCACCACCGTGATTTTGATCTTAACCTCCCAGCTTTTCCGGACTTTTCAAAGAAGTTTTTCGTCGATGATGAGGTTTCCAGCCCTTTACCTGCCGCAAAGAAGCCCTGTCTTTTCAAGATTGAAATTCCTCATCACTGA 750 0.4907 MAMEALNSPTTATPFTPFEEPNLNYLDTPWTKGKRSKRSRMDNHHHEEPSCTEEEYLAFCLIMLARSGNNNNNNNKVTLSTAKPVLSDTESAPLTAKLSHKCSVCDKAFSSYQALGGHKASHRKHAVMSTAEDQTTTTSSAVTTSSASNGKIKTHECSICHKSFPTGQALGGHKRCHYEGSVGAGAGGGNSTVTASEGVGSSHSHHRDFDLNLPAFPDFSKKFFVDDEVSSPLPAAKKPCLFKIEIPHH* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1114 249 MobiDBLite consensus disorder prediction 127 147 - -
Mal2g1114 249 MobiDBLite consensus disorder prediction 130 147 - -
Mal2g1114 249 MobiDBLite consensus disorder prediction 1 20 - -
Mal2g1114 249 MobiDBLite consensus disorder prediction 26 48 - -
Mal2g1114 249 PANTHER ZINC FINGER PROTEIN ZAT10 1 240 - -
Mal2g1114 249 ProSitePatterns Zinc finger C2H2 type domain signature. 102 122 IPR013087 -
Mal2g1114 249 ProSiteProfiles Zinc finger C2H2 type domain profile. 155 177 IPR013087 -
Mal2g1114 249 MobiDBLite consensus disorder prediction 1 18 - -
Mal2g1114 249 ProSitePatterns Zinc finger C2H2 type domain signature. 157 177 IPR013087 -
Mal2g1114 249 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 1 240 IPR044653 GO:0003700
Mal2g1114 249 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 122 IPR013087 -
Mal2g1114 249 SUPERFAMILY beta-beta-alpha zinc fingers 100 177 IPR036236 -
Mal2g1114 249 Pfam C2H2-type zinc finger 155 178 - -
Mal2g1114 249 Pfam C2H2-type zinc finger 100 124 - -
Mal2g1114 249 Gene3D Classic Zinc Finger 98 177 - -
Mal2g1114 249 SMART c2h2final6 155 177 IPR013087 -
Mal2g1114 249 SMART c2h2final6 100 122 IPR013087 -
Mal2g1114 249 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1114 Mal-Chr2 13157135 13157884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1114 1 246 C2H2 Transcription Factor Family AT1G27730 48.221 2.75e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal2g1114 zf-C2H2_6 1.8e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1114 - - gmx:100776038 307.375