Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1076 ATGGAGAGAGATATGCTACATTGGTTGAAACCCCAAATTGAAGAAGATTGGTACGTGAACAACATACCACCTCATACTGAAGAACTTATCCCAAATCTACAAATCCACACTCAACAACAAAACATTGTCGATCCTTCAGATCCAAACACTTTTACTCTTATGCATCATTTAGGTTCCTCACTTTTAATGTCACCACCCAAATCCAATTTCTCAAATCTACTAAATACCAACAACAATATCAACATAAGTGGCACCGCCACCACCACCAACAATGACAAAAACAACCCATTTGGTAATGTCTTCAATTTAGAATCCCAAGGTGCTTTCCAATCAACATTTCCATGGTTGAAGGATTTTGAGAAGAAGATGGGGAAAAATGGAGATGGGGAGGTTGACGGAGGACTGAATTGTGATTCTAATGAGACTGATGATGTTGGAAAGATTGGAAACCATGGAAAAAATGAGGTTATTAATTATAATGCAAATAACAATGTTGGTGGTAGTAATAATAACATCATAGATAATAATTATGATGATGATGATGATGAAGATTGTGTTGTCGAGGGGGACCGAAAAGGTAAGAAGAAGGAAAACCCATCAAAGAGTCGCATGGCTGAGAGGCGGCGCAGGCAGAAACTAGGCGATAGGATGTACATGCTTCGTTCTGTTGTGCCAAAGATTACCAAGATGAATAAAGTTTCAATACTTGGGGATGCTGTTGACTACTTGAAGGAGTTACAACAACAAATTAATGATCTTCAAAGTGAGCTAGAGTCAAGCTCTTCTAGATCATCTATGCCACCGCCTACAAGCTTTCACACTATGACACCCACCATGTCAACCCTTCCAGTTCAAGTGAAAGAAGAGTTGTGTTCTAGCAATATGCCAAGCCTTAAAAATCAAGCAGCAAAGGTAGAGGTTAGAGTAGGGGAAGAGGGGATTGTCAACATCCATATGTTTTGTGCCTCCAAACCGGGTATTTTGCTGTCAACTATGAGGGCATTGGATAGCCTTGGATTGGATGTTCATCAAGCTAACATGAGTTGTTTCAATGATTTTTCTTTAGATGTGTTCAAAGCTGAGCAACACAAAGAAGGTCAGGAATTGGCCTCCGAGCAAATTAAAGCAGCATTGTTGAATACATTGGGTTTTCATTGA 1158 0.3955 MERDMLHWLKPQIEEDWYVNNIPPHTEELIPNLQIHTQQQNIVDPSDPNTFTLMHHLGSSLLMSPPKSNFSNLLNTNNNINISGTATTTNNDKNNPFGNVFNLESQGAFQSTFPWLKDFEKKMGKNGDGEVDGGLNCDSNETDDVGKIGNHGKNEVINYNANNNVGGSNNNIIDNNYDDDDDEDCVVEGDRKGKKKENPSKSRMAERRRRQKLGDRMYMLRSVVPKITKMNKVSILGDAVDYLKELQQQINDLQSELESSSSRSSMPPPTSFHTMTPTMSTLPVQVKEELCSSNMPSLKNQAAKVEVRVGEEGIVNIHMFCASKPGILLSTMRALDSLGLDVHQANMSCFNDFSLDVFKAEQHKEGQELASEQIKAALLNTLGFH* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1076 385 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 194 264 IPR036638 GO:0046983
Mal2g1076 385 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 197 246 IPR011598 GO:0046983
Mal2g1076 385 ProSiteProfiles ACT domain profile. 316 385 IPR002912 -
Mal2g1076 385 SMART finulus 203 252 IPR011598 GO:0046983
Mal2g1076 385 CDD ACT_UUR-ACR-like 317 382 - -
Mal2g1076 385 MobiDBLite consensus disorder prediction 161 213 - -
Mal2g1076 385 MobiDBLite consensus disorder prediction 187 213 - -
Mal2g1076 385 CDD bHLH_AtAMS_like 200 258 - -
Mal2g1076 385 Pfam Helix-loop-helix DNA-binding domain 203 247 IPR011598 GO:0046983
Mal2g1076 385 PANTHER BHLH TRANSCRIPTIONAL FACTOR 140 385 - -
Mal2g1076 385 Gene3D - 188 262 IPR036638 GO:0046983
Mal2g1076 385 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 140 385 - -
Mal2g1076 385 Coils Coil 236 263 - -
Mal2g1076 385 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1076 Mal-Chr2 12519529 12525213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1076 199 361 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 65.644 1.28e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g1076 HLH 3.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1076 - - mtr:MTR_3g104100 428.328