Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1068 ATGAGAGTAGCTAGGAAATGCTCATATTGTGGAAACTTTGGTCACAATTCAAGGACTTGTAGTAACAGTCTCAGTCAAGAGCAATTTAATTTTTATTCTTCTTCATATTTGGCCACAAAAAGGAGTTTCAGAAAGAACTACCTGCTACCATTAGAGAGCTCTTTATCAATATCCTCTTCCTCGTCTACCCTGTTTGCTTCAAATGAAAATTCAGATAGTTACTTAGGAAATGCCCACATATCAACAATTAGATCCAGTAAAAAAGGTATGCCATGGACTGAGGAGGAGCACAGAATATTTCTTAGAGGACTTGAGAAGCTGGGGAAGGGTAACTGGAGAGGTATATCTCGAGATTTTGTAACAACAAAAACACCAACCCAGGTAGCAAGTCATGCACAAAAACATTTTCTCCGTCAGTCTCACTCTCAGAATAGCTTTGTCAATAAAAGAAAACACCATCTTAGCCTCCTTAATGTGGGATGTGAAAAATCAGGAATAAGTAATTTGACTGCAAATGATATCAGCTGCATAAGCCAACTAAGTGGAAGTAGAAATTTTCTTCCTCAGTGGCTTTCTAATCCTCAATATTCAATGCTGAAATGGTTTAACCCTTCAACATCAACGAGTACTTCTCAGAGTGCAACACCTGATTTAGAACTCAAACTTGCAACTCCCCATGCCATTATAGAAAAGCGTGCTCTTATTTTGAACCCCCATGCTCAAAGAATTCAAATTCATAGGTGTTTAAAATGA 753 0.3785 MRVARKCSYCGNFGHNSRTCSNSLSQEQFNFYSSSYLATKRSFRKNYLLPLESSLSISSSSSTLFASNENSDSYLGNAHISTIRSSKKGMPWTEEEHRIFLRGLEKLGKGNWRGISRDFVTTKTPTQVASHAQKHFLRQSHSQNSFVNKRKHHLSLLNVGCEKSGISNLTANDISCISQLSGSRNFLPQWLSNPQYSMLKWFNPSTSTSTSQSATPDLELKLATPHAIIEKRALILNPHAQRIQIHRCLK* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1068 250 SUPERFAMILY Homeodomain-like 85 140 IPR009057 -
Mal2g1068 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
Mal2g1068 250 ProSiteProfiles SANT domain profile. 87 140 IPR017884 -
Mal2g1068 250 ProSiteProfiles Myb-like domain profile. 84 136 IPR001005 -
Mal2g1068 250 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 159 - -
Mal2g1068 250 PANTHER TRANSCRIPTION FACTOR KUA1 4 159 - -
Mal2g1068 250 CDD SANT 91 136 IPR001005 -
Mal2g1068 250 Gene3D - 90 141 - -
Mal2g1068 250 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 87 139 IPR006447 GO:0003677
Mal2g1068 250 SMART sant 88 138 IPR001005 -
Mal2g1068 250 Pfam Myb-like DNA-binding domain 90 135 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1068 Mal-Chr2 12470323 12471418 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal2g1068 Myb_DNA-binding 7.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1068 - - mtr:MTR_3g104370 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1068 2 12470323 12471418 Mal2g1068 2 12470323 12471418 ECH