Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1056 ATGAAGGGAATTAGAGTGAAAGAGGAAGAAATTTTAGCATATGTAAATGTTGGTTCAACATCATGTAACTCTTCATCTTCCTCTTCGGGTTCAAATCTTACACCAAAACCAATGGAAGGGTTACATGAAATGGGTCCACCTCCATTTCTCACCAAAACCTTTGATGTTGTTGAAGATCCATCAACTGATTCGATTGTTTCATGGAGTGGAGCTCGTAACAGTTTTGTTGTTTGGGATCTTCATAAATTCTCCACTGCTATTTTACCTCGTTACTTCAAACACAGCAATTTCTCTAGCTTTGTTCGACAACTCAACACTTATGGTTTTAGAAAAGTTGATCCGGATCGATGGGAATTTGCAAATGAAGGGTTTTTAGCTGGACAGAGGAACTTGTTGAAAACAATCAAGAGAAGAAGAAATGTAACACAGTCACAGTCTATGAATCAAGAATCAGGTGGAGCTTGTATTGAATTAGGAGAGTATGGTCTTGAAGGTGAGATTGAGAGGTTGAGAAGGGACAGGACTGTTTTAATGGCTGAAATTGTGAAGTTGAAGCAGCAGCAGCATAATTCAAGGGAACAATTATCTGCTATGGAAGCTAGGTTGTTGATCACTGAGAAGAAACATCAACAGATGATGAATTTCCTTGCAAGAGCACTCAGTAATCAATCTTTTATCCAACAGTTGGCACAGAAGAAAGAGTTGAAAGGCGTTGAAATGAAGCGAAAGCGGAGGCTCACTGCTAGTTCAAGTTTGGAGAATTTGCAAAATGATTCTGTAACCATGATGGCAGTGCCAATTGAATCGGTGGTTGATTATTCTGGTCAAGAACAACAAGAGGGGTTGACAGCTATTGAGTCTGAGATGGAGACATTGTTAACTGCTTATGATAATGAATCAAGCAGTGAAATCAAAGACTACACTACATTGAATTCAGTTCCAAGTGCTAATGAGAGTAATTTGGGTGATGCTGTGTGGGAGGATTTACTGAACCAAGAGTTGGTTGGTGGGAATCCAGAAGATGAAGTTGTGATTGGTGATTTTTCTCAAATTGATGTGCCGGTTGAGGATTTGGTAGAAAAGAGTGATGATTGGACTGTGGATTTGCAGAACCTTGTTGATCAGATGGGTTTTGAACCTTAG 1143 0.3946 MKGIRVKEEEILAYVNVGSTSCNSSSSSSGSNLTPKPMEGLHEMGPPPFLTKTFDVVEDPSTDSIVSWSGARNSFVVWDLHKFSTAILPRYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLAGQRNLLKTIKRRRNVTQSQSMNQESGGACIELGEYGLEGEIERLRRDRTVLMAEIVKLKQQQHNSREQLSAMEARLLITEKKHQQMMNFLARALSNQSFIQQLAQKKELKGVEMKRKRRLTASSSLENLQNDSVTMMAVPIESVVDYSGQEQQEGLTAIESEMETLLTAYDNESSSEIKDYTTLNSVPSANESNLGDAVWEDLLNQELVGGNPEDEVVIGDFSQIDVPVEDLVEKSDDWTVDLQNLVDQMGFEP* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1056 380 Gene3D - 42 139 IPR036388 -
Mal2g1056 380 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 23 335 IPR027725 -
Mal2g1056 380 SUPERFAMILY "Winged helix" DNA-binding domain 45 138 IPR036390 -
Mal2g1056 380 PRINTS Heat shock factor (HSF) domain signature 87 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal2g1056 380 PRINTS Heat shock factor (HSF) domain signature 49 72 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal2g1056 380 PRINTS Heat shock factor (HSF) domain signature 100 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal2g1056 380 Pfam HSF-type DNA-binding 49 138 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal2g1056 380 ProSitePatterns HSF-type DNA-binding domain signature. 88 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal2g1056 380 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Mal2g1056 380 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 23 335 - -
Mal2g1056 380 SMART hsfneu3 45 138 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal2g1056 380 MobiDBLite consensus disorder prediction 19 40 - -
Mal2g1056 380 Coils Coil 167 201 - -
Mal2g1056 380 MobiDBLite consensus disorder prediction 19 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1056 Mal-Chr2 12303270 12304761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1056 35 378 HSF AT2G26150 52.260 2.69e-122 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal2g1056 HSF_DNA-bind 4e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1056 K09419 - gmx:100794605 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1056 2 12303270 12304761 Mal2g1056 2 12303270 12304761 ECH