Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1054 ATGGGTGCTTCAGGAAAATGGGTCAAAGCATTAATCGGATTCAAGAAACCAGATAAGGACGATCAACATGTGAAGGAGGGTGGTAAAAGCAAGAAATGGAGGTTATGGAGAAGTTCATCAGGTGATAATAGTTCATGGAAGGGTTTCAAAACAAACCCTCACAAAGCAGCTTCTGAAGGGTCTGAATCACCAACCGCAGCAGAAGCTTACACCGCTGCAGTGGCTACCGTTGTTAGAGCTCAACCTAAGGATTTTAGACTCGTTAGGCAAGAATGGGCTGCTATAAGAATCCAAACCACTTTCCGCGCCTTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAGGCGGTGGTGAGGATTCAAGCTCTTGTCAGGGGTAGACAAGTGAGGAAGCAAGCTGCAGTGACATTGAGGTGCATGCAGGCCTTAGTCCGTGTTCAAGCTCGAGTAAGAGCTCGTCGGGTGAGGATGTCTATGGAGGGGCAAGCTGTGCAGAATATGCTGAACGAGCGACGAAGCAAGTTTGAACTTTTGAAGGAAGCAGAGGAAGGGTGGTGTGATAGCATAGGAACATTGGAAGATGTTAAATCAAAAATACAAATGAGGCAAGAAGGAGCTTTCAAAAGAGAGAGGGCACTGGCATACTCACTTGCTCAGAAGCAATGCAGGCCAACCTCAAGCACTAATTCACGAACCAACGCCTCGTTTTCCACTCTCAAGAATCACGAGATGAACAAAACTAATGGGGGATGGAGTTGGTTGGAAAGATGGATGGCGGCTAAGCCTTGGGAGACTAGATTGATGGAACAATCTCATGCTGAGAGCTTAGAAAAAACCCCACCACCACCTCCAAAGAAAAATGCGGAATCCTTTGTAAGCTCGAATTTGAAACCATGCTCTGTCAAAATCAAGAAGAACAATGTCACAACAAGGATTTCTGCTAAACCTCCTCCCCATATCGGACAAGCTACTCGTTCATCGTCAAGTCCAAGTTCCGAGTTTCGGTACGATGAGAGTTCTGCATCATCTTCAATTTGTACATCCACAACTCCAATGTCAGGGAACACTTGTGAAAGGACCGAGGATAGTTGTAACAGCACTAGGCCGAATTACATGAACCTGACTCAGTCAACCAAGGCAAAGCTAAAACCGGGTAGTAATCAAATGTATAACAGAGCTCAAAGGCAACAGTCAATGGATGAATTTCAATTTATGAAGAGGGCTGCAGTTTTCTCTAATGGAGATTCTAAAAGCATAGCTGCTTCTGATCATTCTCTCAACTTTTCTAGGCCACTTCACCTACCAACTCACTTGGATAAGAGCTCGGTGAGGCCACGATGA 1338 0.4552 MGASGKWVKALIGFKKPDKDDQHVKEGGKSKKWRLWRSSSGDNSSWKGFKTNPHKAASEGSESPTAAEAYTAAVATVVRAQPKDFRLVRQEWAAIRIQTTFRAFLARRALRALKAVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRSKFELLKEAEEGWCDSIGTLEDVKSKIQMRQEGAFKRERALAYSLAQKQCRPTSSTNSRTNASFSTLKNHEMNKTNGGWSWLERWMAAKPWETRLMEQSHAESLEKTPPPPPKKNAESFVSSNLKPCSVKIKKNNVTTRISAKPPPHIGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTCERTEDSCNSTRPNYMNLTQSTKAKLKPGSNQMYNRAQRQQSMDEFQFMKRAAVFSNGDSKSIAASDHSLNFSRPLHLPTHLDKSSVRPR* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1054 445 MobiDBLite consensus disorder prediction 319 363 - -
Mal2g1054 445 ProSiteProfiles IQ motif profile. 90 118 IPR000048 GO:0005515
Mal2g1054 445 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 444 - -
Mal2g1054 445 MobiDBLite consensus disorder prediction 18 36 - -
Mal2g1054 445 MobiDBLite consensus disorder prediction 269 292 - -
Mal2g1054 445 MobiDBLite consensus disorder prediction 37 59 - -
Mal2g1054 445 ProSiteProfiles IQ motif profile. 114 141 IPR000048 GO:0005515
Mal2g1054 445 SMART iq_5 112 133 IPR000048 GO:0005515
Mal2g1054 445 SMART iq_5 89 111 IPR000048 GO:0005515
Mal2g1054 445 MobiDBLite consensus disorder prediction 306 363 - -
Mal2g1054 445 PANTHER IQ-DOMAIN 5-RELATED 1 444 - -
Mal2g1054 445 Pfam IQ calmodulin-binding motif 114 131 IPR000048 GO:0005515
Mal2g1054 445 Pfam IQ calmodulin-binding motif 92 111 IPR000048 GO:0005515
Mal2g1054 445 MobiDBLite consensus disorder prediction 18 64 - -
Mal2g1054 445 Gene3D - 88 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1054 Mal-Chr2 12290708 12292891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1054 1 439 IQD Protein Family AT2G26180 59.502 3.47e-151 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1054 - - gmx:100799714 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1054 2 12290708 12292891 Mal2g1054 2 12290708 12292891 ECH
Mal1g5627 1 132347674 132348391 Mal2g1054 2 12290708 12292891 PCT