Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1051 ATGGCCCCAAAGAGAACATCAAGAGGAAAACAAAAGAGAGAGATGAAGAAGATTGAGAAAAAGAATGAACTTTTTGTAGCATTTACGAAGAGAAAGTCGGGCATTTACAACAAAGCCTCAGAATTATCAACACTTTGTGGGGCTTTTGTTGATATTCTTATGATTTCTCCAAAAGGGAAACCTTATTGCTATGGAGAACCTTCTTCTCAATCTATTTCAAGAAATAGTTTGAAGGATGAAAACCCTTCAGTAGTGGAGGAATTCAAGAAACAAAAGATTGTTGAACATAATAGAAAAAATGATTATGTTTTGGATAAAAAGTATGTTGCAGAAGCACGCCGTGAAAATTTGAAGACATTGGTAAGTTCTGGCTATTGGTCGATCAAAGAAGATGTTAAAAGCTACCAATATGATCAAGTAAAAGAAGTGGACACATCTTTAGTGAATTTCACCAATAAAATTATTAATAATGTCCTAAGCAAAGTAGGAGAGATTAATCATCATGCAATTTCTTCCATAGATGAACTCAATGGAGTCAAAACAAATCCTCCTTATGTCTTTGGTGCAAGTAAAGGTAAGGTTGTTACTGCTTCTCGTGATACAAATCAAACACAAGGACTCAACCTTGTTGGTGCAACTGCAAGCGGAAGTGATGCTCCTCAAGATATATGA 672 0.3527 MAPKRTSRGKQKREMKKIEKKNELFVAFTKRKSGIYNKASELSTLCGAFVDILMISPKGKPYCYGEPSSQSISRNSLKDENPSVVEEFKKQKIVEHNRKNDYVLDKKYVAEARRENLKTLVSSGYWSIKEDVKSYQYDQVKEVDTSLVNFTNKIINNVLSKVGEINHHAISSIDELNGVKTNPPYVFGASKGKVVTASRDTNQTQGLNLVGATASGSDAPQDI* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1051 223 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 17 64 IPR002100 GO:0003677|GO:0046983
Mal2g1051 223 PANTHER MADS BOX PROTEIN 7 160 - -
Mal2g1051 223 SMART madsneu2 8 67 IPR002100 GO:0003677|GO:0046983
Mal2g1051 223 SUPERFAMILY SRF-like 9 74 IPR036879 GO:0003677|GO:0046983
Mal2g1051 223 ProSiteProfiles MADS-box domain profile. 8 68 IPR002100 GO:0003677|GO:0046983
Mal2g1051 223 PANTHER AGAMOUS-LIKE 58-RELATED 7 160 - -
Mal2g1051 223 Gene3D - 21 98 IPR036879 GO:0003677|GO:0046983
Mal2g1051 223 PRINTS MADS domain signature 45 66 IPR002100 GO:0003677|GO:0046983
Mal2g1051 223 PRINTS MADS domain signature 30 45 IPR002100 GO:0003677|GO:0046983
Mal2g1051 223 PRINTS MADS domain signature 10 30 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1051 Mal-Chr2 12269024 12270068 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1051 5 155 Type I MADS-box Gene Family AT4G36590 34.395 2.44e-17 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mal2g1051 SRF-TF 9.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1051 - K12412 mtr:MTR_3g104630 152.525