Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1049 ATGTCTCTTCAAGAGCCATGTGATCCCCCACAACAAAATGTAACCATGGTGGCTGTTGATAAAGACAAGAACAGTGCTTATGCCTTTCATTGGGCAATTAAACATATCGATAATCCTGTCATTATTGCTGTCCATGTTAAACACAAAAATTTACCTAACCGTAGGCTAATATGTTATTTTGTTAATGCAGAGGGCACAAATGTTTTTCCACCGGATGAAGACGAAGTAGCACAAATTTTCAATAACTTACGTGCATTGTGTCAACGTAGAAATATCACTATGAAAGAAGCAGTAATTGATGATAATGATGTTGTGAGAGGACTATTAGATTTTGCAAACAGAAATCTCGTACATAGTATTGTTATTGGTAAATCAACCAAGAAAAAAAATATGCCAAGTCTAAAAAAAATTAAAGCCTCTATACCAACAACCATGATCAAATCAGCACCAGATTATTGCTCTGTATACATAATTTCCAAATTGAAGCTTGTGTCAGCTCGATCAGCGGCACGATCAATGGGAAACCAGATTATTCCAACAAAACAATTACCTGTTCAAGTATTCTCACATAGTGAATTTGAAAGTGGAATGAGGTCAATACTACCTAGAACTGGGGGCACTAATGAAGAGTCAGAATCAAGGTCTTTTGACAGCATTAGTACGGTAAAAGGACCGGCACGTGAGAGGCCGAGGAGTGCAGGAAGTAATCAATCAATGGACAGCATTGATCTACCTGGTCGTGGACGACATTGGGCATCGATGGACGAAAGAGAAATTGCAGCTCTCGGGCCAATTGTCGACGTAAACAAACATGATTTCGATCGAATGGATTCTATCGGGACACATCAAACTTCCAATAACCCAAAAGAACTTCAAGCTGAGATGAAAAGATTGAGGCTTGAATTGAAGCAAACTATGGACATGTACAGCTCAGCTTGCAAACAAGCAATATCAGCAAAAAATCAGGCGGAACAAATTCGTAGATGGAAAGCGGAAGAGGAAGTAAAGGCTGTGGAAGTTAGGTTATCTCAGGAGGCAGCTCTTGCAATGGCAGAAAGGGAGAAGGCTAAAGCCAAAGCTGCATTAGAAGCAGCTGAGGAAGCCAGGTTGAAGGCTCAACAGGAGGCACAAAGAAGAAAGGAGGCAGAGATGAAGGCTAGGAAAGAGGCAGAAGAGAGGGATAGAGTATTAACTACATTGGCTCAAAATGATAATCGATATAGAAAATACACTATGATGGAGATTGAAGTTGCTACTGAGAAATTCTCACCATCAAAGAAACTAGGTGAAGGTGGATATGGACCTGTGTTTAAAGGTCACCTTGATCACACAGCAGTTGCAATCAAACTCTTAAATCCTGAGGCTGCTCAAGGCAGGAAGCAATTCCATCAAGAGGTTGAGGTACTATGTAATATTAGACATCCAAATATGGTCCTCCTCCTCGGAGCATGTCCGGAGCATGGTTGTTTGGTGTATGAATTCATGGAAAACGGTACCTTAGAAGATAGATTATTTCAGAAAAATAACAGCAAGCCTCTATCATGGAAAAAAAGGTTCCAAATAGCAGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAACAAAGCCAGAGCCAATCGTGCACCGAGACTTTAAACCCTCAAACATTCTGTTAGACAGAAATTACGTGAGTAAAGTCAGTGATGTCGGTCTTTCAAGATTAGTCCCTCCTTCTGTAGCTGACAATGTGACACAATATTACATGACTTCAGCTGCTGGAACATTGTGTTATATTGATCCTGAGTATCAACAAACAGGAATGTTAACAACAAAATCGGATATATATTCACTAGGAATAGTGCTACTGCAGATAATCACAGCCAGGCCTCCTACGGGACTAGCTCATCAAGTTAAAAAGGCAATTGAAAAGGACCGGTTCGAGGAGATTCTTGATTCTGCGGTTACTGATTGGCCAGTTGAAGATGCCCTATCATTTGCTAAATTAGCATTGAATTGTGCAGAACTCTGCAAGAAAGATAGGCCAAATCTTGCATCAGATGTGTTGCCAGAGCTTAACAGGTTAAGAGACCTTGGGTGTAATGATAATCAAGTTTTTACGGATACCAAGAACAATAGCCATTCGCCGCGTCCTCCTATGCCTACCTGA 2148 0.4074 MSLQEPCDPPQQNVTMVAVDKDKNSAYAFHWAIKHIDNPVIIAVHVKHKNLPNRRLICYFVNAEGTNVFPPDEDEVAQIFNNLRALCQRRNITMKEAVIDDNDVVRGLLDFANRNLVHSIVIGKSTKKKNMPSLKKIKASIPTTMIKSAPDYCSVYIISKLKLVSARSAARSMGNQIIPTKQLPVQVFSHSEFESGMRSILPRTGGTNEESESRSFDSISTVKGPARERPRSAGSNQSMDSIDLPGRGRHWASMDEREIAALGPIVDVNKHDFDRMDSIGTHQTSNNPKELQAEMKRLRLELKQTMDMYSSACKQAISAKNQAEQIRRWKAEEEVKAVEVRLSQEAALAMAEREKAKAKAALEAAEEARLKAQQEAQRRKEAEMKARKEAEERDRVLTTLAQNDNRYRKYTMMEIEVATEKFSPSKKLGEGGYGPVFKGHLDHTAVAIKLLNPEAAQGRKQFHQEVEVLCNIRHPNMVLLLGACPEHGCLVYEFMENGTLEDRLFQKNNSKPLSWKKRFQIAAEIATALLFLHQTKPEPIVHRDFKPSNILLDRNYVSKVSDVGLSRLVPPSVADNVTQYYMTSAAGTLCYIDPEYQQTGMLTTKSDIYSLGIVLLQIITARPPTGLAHQVKKAIEKDRFEEILDSAVTDWPVEDALSFAKLALNCAELCKKDRPNLASDVLPELNRLRDLGCNDNQVFTDTKNNSHSPRPPMPT* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1049 715 Gene3D HUPs 8 147 IPR014729 -
Mal2g1049 715 Gene3D Phosphorylase Kinase; domain 1 400 494 - -
Mal2g1049 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Mal2g1049 715 PANTHER OS02G0152300 PROTEIN 14 702 - -
Mal2g1049 715 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 14 702 - -
Mal2g1049 715 SUPERFAMILY Protein kinase-like (PK-like) 406 677 IPR011009 -
Mal2g1049 715 Coils Coil 341 393 - -
Mal2g1049 715 Pfam Protein tyrosine and serine/threonine kinase 425 678 IPR001245 GO:0004672|GO:0006468
Mal2g1049 715 MobiDBLite consensus disorder prediction 199 244 - -
Mal2g1049 715 MobiDBLite consensus disorder prediction 696 715 - -
Mal2g1049 715 Gene3D Transferase(Phosphotransferase) domain 1 495 707 - -
Mal2g1049 715 CDD STK_N 14 160 - -
Mal2g1049 715 ProSiteProfiles Protein kinase domain profile. 422 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1049 715 MobiDBLite consensus disorder prediction 201 220 - -
Mal2g1049 715 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1049 Mal-Chr2 12219155 12222775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1049 94 697 Receptor kinase-like Gene Family AT5G12000 56.452 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mal2g1049 PK_Tyr_Ser-Thr 5.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1049 - - gmx:100798861 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1049 2 12219155 12222775 Mal2g1049 2 12219155 12222775 ECH