Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1038 ATGAGTTTAAGAACAACCCAACAAGATGATTCTTCATCTTCAGAAATCCACATACCAGCTGAGATTGATTGGCACATGCTTGATAAATCAAAGTTTTTCTTCCTCGGCGCCGCCTTATTTTCCGGTGTTTCAGCAGCCCTTTATCCAATGGTTGTGTTGAAAACTCGCCAACAGGTTTCTTCTTCACACTACTCTTGTATCAACATGTCATGTGCTATTATGCGTTATGAAGGTTTTAGAGGTTTTTATAAAGGTTTTGGTACTTCTTTAATGGGAACTATCCCTGCTAGAGCACTTTACATGACAGCACTTGAAGTTACAAAGAGTAACGTTGGTACTGCTTTTGTTGAATTGGGTTTTTCTGATAATACTGCTACTGCTGTTGCTAGTGCTGCTGCTGGTGTTACTTCTGCTATGTCTGCACAATTGGTTTGGACACCAATTGATGTTGTTAGTCAAAGACTTATGGTTCAAGGTAGTTGTAATAGTGGAGGGAAGAGTATTTTAGCTAATCTTAACTCTGAAAATTATAGAAATGGTTTTGATGTGTTTAGGAAAATTCTTTGTGCTGATGGACCAAGAGGGTTTTATAGAGGATTTGGGATTTCAATTTTGACTTATGCACCTTCTAATGCTGTTTGGTGGACTTCTTATAGTATGGTTCATAGGTTTATTTGGGGTAGTTTTGGTTCATGTTTGTGCAAGAGGGAAAATAATAGTGGTGATACTGATGGGTGTGTTGGTTTTCGGCCTGATTCTAAGGCAATGGTGGGTGTACAAGGTTTGAGTGCTGTTGTGGCTAGTGGGGTTTCTGCAATTGTGACAATGCCTTTTGATACAATTAAGACTAGGTTGCAGGTTTTGGATACAGAGGAGAATGGTAGAAGGAGGCCTTTAACTTTTGTGCAAACGGTTAGGAATTTGGTGAATGAAGGTGGTTTGTTTGCTTGTTATAGAGGATTGGGACCAAGGTGGGTTTCAATGTCTATGTCTGCTACCACTATGATTACTACTTATGAGTTTTTGAAACGCATGTCTACCAAGAGGCAAGATTGA 1056 0.393 MSLRTTQQDDSSSSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSSHYSCINMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMTALEVTKSNVGTAFVELGFSDNTATAVASAAAGVTSAMSAQLVWTPIDVVSQRLMVQGSCNSGGKSILANLNSENYRNGFDVFRKILCADGPRGFYRGFGISILTYAPSNAVWWTSYSMVHRFIWGSFGSCLCKRENNSGDTDGCVGFRPDSKAMVGVQGLSAVVASGVSAIVTMPFDTIKTRLQVLDTEENGRRRPLTFVQTVRNLVNEGGLFACYRGLGPRWVSMSMSATTMITTYEFLKRMSTKRQD* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1038 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 255 345 IPR018108 -
Mal2g1038 351 Gene3D Mitochondrial carrier domain 31 351 IPR023395 -
Mal2g1038 351 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Mal2g1038 351 PRINTS Mitochondrial carrier protein signature 264 286 IPR002067 GO:0055085
Mal2g1038 351 PRINTS Mitochondrial carrier protein signature 37 50 IPR002067 GO:0055085
Mal2g1038 351 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Mal2g1038 351 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 351 - -
Mal2g1038 351 Pfam Mitochondrial carrier protein 260 348 IPR018108 -
Mal2g1038 351 Pfam Mitochondrial carrier protein 126 226 IPR018108 -
Mal2g1038 351 Pfam Mitochondrial carrier protein 41 110 IPR018108 -
Mal2g1038 351 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 351 - -
Mal2g1038 351 SUPERFAMILY Mitochondrial carrier 25 342 IPR023395 -
Mal2g1038 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 224 IPR018108 -
Mal2g1038 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 110 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1038 Mal-Chr2 12142970 12144025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1038 15 351 Chloroplast and Mitochondria Gene Families AT5G26200 66.766 1.20e-162 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1038 K15121 - gmx:100784202 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1038 2 12142970 12144025 Mal2g1038 2 12142970 12144025 ECH