Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1034 ATGGAAGATGAAGATCTTATGTTTGATGCCATTGACCCAAGTTTTTTCAACATGAGTAACCCCACATTGGCAGATTTATCCATTGATAACAACAATGTGGGTCCCACTGCACTGTCCCAAGGCCAACAAACTCAGCATATCCGTTTGAGTAACACCAATCTAGCCAATTTAACCACTAATAACAATAATATTAGATCCCACCAAAATCACCATGGGCTTGGAATATTTAACCGGGGACAGAGTAGTAATTTTAATGATCTCTTTTCCAATCCACCATCCCAACAAAATTTTCATGGACTTGGAATACTTCAACGCAGACATCCTAGTAATCAACATTTTTCCTCCACATTATCTCAACAAAATCAACATGGCCTTGGAATACTTCAACATGGACAAGGTAGTAATAATGGAAATGATCCATTTAATTCCAATGCAATGCCACAACAGAGTCAACATGGTATTGGTAATAATGATCCATTTAGTTATAATTTAGTATCACCAGAAAATGACAATGCTATTCAACAAGGGAATGGTGGTAATAATGATCCATTTATTTACAATTTAGTATCATCAGAAAGTGACCAAGATATTCAACAAGGACATGATGATGATGATAATGATTCATTTGCCAATGCTATGTCACAACAAAATCAGCATGATGTACAACAACAACATGGACAGGGTAGTAATGATGAAACATTTTCTGTTCCAATGGTTCAAGATCAATATGATCATCAGAACAATAATAATAATAATTTTTCATCTGGAGGAAATAACTTTGAAGTGGGTGGTAGTTCATCACGAATAATGCATGAGAATCAACAACAAACTCAACCTGCAATTCAGATTCCGGTTTTGCTGAACCAAACCGAAACGCAAACACTTAATCAATGGCCACCCACAGAAGTTCCATATTTTTGCAGTTGTTGTCATGTTCTCAGAGAAATCATTCACGCTAATGGCATTCAATTTGAAAAGCTTGAGATTCATGGAAGGTTGGGGTTGATTACACATGCAATTCACCATCAGATACCTGTTAATGGGGCCCCATCAATGTATCAAATGATTGATTTTGGTGGGAAAAGCCTTGGTGAAATAAAGAAATCCCTAGCGCAGTATTGTGTGGAACGTAATTTAGCAGGGTACTTTCTATTGCAAGATCCAATGTCTGAGTTTTATGAGACTCTTTGCACTGGATTGGACTGGATTGATGATATAAATATGGAGGGTCCTATTCAAAATAATTCAGATGAGGTGGTGGAGCAAGAGCAAGAGCAAATGGGTGAGAATGGAGCACCTAGGAACCTTTCAGAACAAAGGAAAAAATCTGCAAAGTTGACATTGAGTGATTTATGTGATTACTTTCATCTACCTATTGAGGAAGCAGCGGATCATGAGAATTTGAAGTTATGTCCAACAGTTCTCAAGAAAACTTGTCGTAAAGCAGGATTAACTAGATGGCCTCACAGAAAGGTGAAAAGCCTTTTGAAGCAAATAGCATTACTACTAAGTCAATTGGATATACAAGATCCGGGGGCAAGGGCAAGGACTGAAGGGGAAATTAACAGACTTAAAGATGAAATGGTTGAACATTGTGGTGGACATGTACCAACCGCATTGTATAACGTCGCCGCCTTCTTGCCACCGCAGCAGCAGCGGTAG 1662 0.3821 MEDEDLMFDAIDPSFFNMSNPTLADLSIDNNNVGPTALSQGQQTQHIRLSNTNLANLTTNNNNIRSHQNHHGLGIFNRGQSSNFNDLFSNPPSQQNFHGLGILQRRHPSNQHFSSTLSQQNQHGLGILQHGQGSNNGNDPFNSNAMPQQSQHGIGNNDPFSYNLVSPENDNAIQQGNGGNNDPFIYNLVSSESDQDIQQGHDDDDNDSFANAMSQQNQHDVQQQHGQGSNDETFSVPMVQDQYDHQNNNNNNFSSGGNNFEVGGSSSRIMHENQQQTQPAIQIPVLLNQTETQTLNQWPPTEVPYFCSCCHVLREIIHANGIQFEKLEIHGRLGLITHAIHHQIPVNGAPSMYQMIDFGGKSLGEIKKSLAQYCVERNLAGYFLLQDPMSEFYETLCTGLDWIDDINMEGPIQNNSDEVVEQEQEQMGENGAPRNLSEQRKKSAKLTLSDLCDYFHLPIEEAADHENLKLCPTVLKKTCRKAGLTRWPHRKVKSLLKQIALLLSQLDIQDPGARARTEGEINRLKDEMVEHCGGHVPTALYNVAAFLPPQQQR* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1034 553 MobiDBLite consensus disorder prediction 126 265 - -
Mal2g1034 553 ProSiteProfiles RWP-RK domain profile. 427 516 IPR003035 -
Mal2g1034 553 MobiDBLite consensus disorder prediction 419 439 - -
Mal2g1034 553 PANTHER PROTEIN RKD4 191 533 IPR044607 GO:0003700
Mal2g1034 553 MobiDBLite consensus disorder prediction 126 195 - -
Mal2g1034 553 PANTHER RWP-RK DOMAIN PROTEIN 191 533 - -
Mal2g1034 553 Pfam RWP-RK domain 445 495 IPR003035 -
Mal2g1034 553 MobiDBLite consensus disorder prediction 209 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1034 Mal-Chr2 12097950 12100137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1034 421 495 AtRKD Transcription Factor Family AT4G35590 42.500 4.53e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mal2g1034 RWP-RK 8.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1034 - - mtr:MTR_3g465110 542.347