Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1020 ATGATGGAGAAGAAAAGAGAAGTGGTGGTTCCTATTTCATATGTGGGTGGAGAGAGCCATGACAATGATCATGAGTTGAAAGGGGTTGAATCTTCACCTCGCTACTTTTCAAAGTCACCACCTTTGAATTGTGCTTCCCCTGAAATAAGGTTCATCCCTAGCCCAAATAAACCCCCAAAAATTCCTGCTACAAATGAAAACCTTACCCCAAGAAAAAATCTTGTGAGATCAGTGTTTTCTAAGCCCAAATCAAGATTTGGTGAACAACCTTACCCTATTGATGGAACCCTTTTAGAAGAGAATGTTAGTTCACCATATAAAGCATCACATTCACCGAATAACAAATCCGGAATGGTTAATAGAACCGTTTCGATTACTTCTGTCGTCACTCCTAGAACACCGTTGATGGCATCTCCAGGTACTGCTGGTGAGGATCCTGATGAAATCATTTACAAGAAAGTTGAATTTAGTAAAGGCAAGCGTAGGAGACTAACGACTAAGGTTTTGATCGAATTGTTCGTGTTTGTGTGCATCGCGGGTAGCTTGTTGGCTAGTTTAACAGTTGAGGAACTAAAAAGGACGAAGATTTGGAGTTTGGGGCTTTGGAGGTGGTGTATGCTTGTGATGGTGACATTTTGTGGCATGTTAGTTACCAAATGGTTCACACACATTGTTGTTTTCTTGATTGAAATGAACTTCTTGTTGAGGAAAAAGGTACTTTATTTTGTCCATGGACTGAAGAAATGTGTCCAGGTTTTCATTTGGATCGCTTTGGTTCTCCTCACATGGGTGCTTTTTATCAATCATGGAGTCCAGCGATCTAAATTGGCCACAAAGATTTTGGATGGTGTAACATGGACTCTTGTTTCCCTTCTCATTGGAACATTTTTGTGGGTCATAAAGACATTGTTGCTAAAGATTTTGGCATCAAGTTTCCATGTCAAATCTTTCTTTGATCGAATTCAAGAATCTATCTTCCATCAATATGTTCTGCAGACTCTCTCTGGGCCTCCACTGATGGAAGAGGCTGAGAAAGTCGGCGGATCTCAAAGTACTTCCCATTTTAGTTTCAGGAGTACAACCAGTAAAGGTAGCACAAAGAAAGAAGTTATTGATATGGCAAAGCTTCACAAGATGAAGCAAGGGAAAGTTTCCTCCTGGACTATGAAGATTTTGGTAGATGCAGTGATGAACTCAAGGCTGTCCACAATCTCTAATTCTCTAGATGAAAGTATTTATGATGGAGAAAATGAACAAACTGATAAAGTAATTACTAATGAGATGGAAGCAACTGCTGCTGCCTATTATGTTTTCAGGAATGTTGCTGCTTCGCCTAGTTGCACTTACATCGATGAGGATGAACTCCGTAGATTCTTGATTAAGGAAGAAGTTCCTTTGGTATTTCCCCTACTGGCACAGACAGAAACAGGGCTAATTACCAGAAAATCTTTAGCAGATTGGGTGTTGAAGGTATATCAAGAACGTAGAGCACTCGCGCACGCCTTAAGCGACACTAAAACAGCAGTTAAACAATTAAACAAGCTTGTGACAGGGGTCCTAGTAGTGGTGACCATAGTAGTGTGGCTTCTTCTAATGGAGATTGCAACAACAAAAGTACTGGTATTTCTCTCATCGCAGCTTGTACTTGCGGCTTTCATGTTTGGAAACACGTGCAAGAATATATTTGAAGCCATCATCTTCGTGTTTGTAATGCATCCATTTGATGTTGGCGATCGATGTTTTATAGATGGCGTTGAGCTATTGGTTGAAGAAATGAATATATTGACAACAGTTTTCTTGAAACTTAATAATGAAAAGGTGTATTATCCAAACTCTGTCCTAGCCATTAAACCGATCAGCAATTATTACAGAAGCCCTAATATGGGTGACAGTGTAGAGTTCTCGGTTGATTTTACTACACCAGCAGAGAAAATTGGAGCGGTGAAAGAAAAAGTAAAGAGGTATTTGGAGAGGAATCCACAATACTGGCATCCTGATCTCAGTTTGGTAGTGAAGGAGATTGAAAATGTAAATAAGATTAAGATGGGTCTTTATGTTACTCACACAATGAACTTTCAAGAATTTGGGGAGAAGACCAAGCGGAGAAGTGAATTAGTGATGGAAGTAAAGAAAATATTTGAAGAGCTTAATATCAGATACAACCTTCTTCCACAAGGTGTTCATATCAGACACATTGAAGCTGATACAAGTTATCTCAAATGA 2223 0.3945 MMEKKREVVVPISYVGGESHDNDHELKGVESSPRYFSKSPPLNCASPEIRFIPSPNKPPKIPATNENLTPRKNLVRSVFSKPKSRFGEQPYPIDGTLLEENVSSPYKASHSPNNKSGMVNRTVSITSVVTPRTPLMASPGTAGEDPDEIIYKKVEFSKGKRRRLTTKVLIELFVFVCIAGSLLASLTVEELKRTKIWSLGLWRWCMLVMVTFCGMLVTKWFTHIVVFLIEMNFLLRKKVLYFVHGLKKCVQVFIWIALVLLTWVLFINHGVQRSKLATKILDGVTWTLVSLLIGTFLWVIKTLLLKILASSFHVKSFFDRIQESIFHQYVLQTLSGPPLMEEAEKVGGSQSTSHFSFRSTTSKGSTKKEVIDMAKLHKMKQGKVSSWTMKILVDAVMNSRLSTISNSLDESIYDGENEQTDKVITNEMEATAAAYYVFRNVAASPSCTYIDEDELRRFLIKEEVPLVFPLLAQTETGLITRKSLADWVLKVYQERRALAHALSDTKTAVKQLNKLVTGVLVVVTIVVWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCFIDGVELLVEEMNILTTVFLKLNNEKVYYPNSVLAIKPISNYYRSPNMGDSVEFSVDFTTPAEKIGAVKEKVKRYLERNPQYWHPDLSLVVKEIENVNKIKMGLYVTHTMNFQEFGEKTKRRSELVMEVKKIFEELNIRYNLLPQGVHIRHIEADTSYLK* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1020 740 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 6 729 - -
Mal2g1020 740 Pfam Mechanosensitive ion channel 514 719 IPR006685 GO:0016020|GO:0055085
Mal2g1020 740 PIRSF Memb_At2g17000 12 738 IPR016688 -
Mal2g1020 740 SUPERFAMILY Sm-like ribonucleoproteins 563 622 IPR010920 -
Mal2g1020 740 Gene3D - 573 622 IPR023408 -
Mal2g1020 740 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 6 729 IPR016688 -
Mal2g1020 740 MobiDBLite consensus disorder prediction 16 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1020 Mal-Chr2 11982430 11985279 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1020 36 729 Mechanosensitive Ion Channel Family AT5G12080 59.744 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1020 K22048 - gmx:100803107 1142.87