Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0997 ATGGGTGGTGAGGGTAGAGTTGAAGTTGTGAGTGACAACGGGTGCTCAAGATTGTTTTCATCTTCAATCAGAAATCTTCAACCATTGGACCAAATGTCTCCTGTTTCATCCTCTTTGCAACTCTCATCAAATGCTCCTTTTGCTGGTCTTGTTATATGTGTTACTGGTTTATCTAAAGAAGCAAGGAATCAGGTCATGGAGGCTACAGTGAGATTAGGTGGCCAGTATAGCCCTAATCTGCATCCTCAATGTACTCATTTGGTGCACAGTTTTGGCGGACGCAAATTTGAGCATGCTTTGAAGCATGGAGCAAAAAATTGTCTCTTTGTTGTCACACTGGGTTGGTTTGTGGATAGTGTTAGGAAAAATGTAAGGTTGACTGAATCACTTTATAGTTTGAAGAGTTATGGGGATAACAAAATGAACTTGGATGATTTTAGACTGCTTCCCGGTTATACAAATGCTGGAAATTGTCTTCCTGCAAGAATCCATGAAACCAATCATACTCATGCTGAAGAATTTCGAAGATTCTCTGGTAGAGAGACTAAGGGAAGTTTGGAGTCAACTTTATCTGGTTGCTCCATCTATGTTGATCCAGGCATTTCATCCGAATTGCAGAAAAAGGTTGTTGAAACGGCCTCAAGAGAAGGTGCTAGCTTGGTGGAACAATGGTTTGTTGGCTGCAATGTTAGTCATGTAGTCACTGAAGGGACTTCCATTCAAAGATATCTTGGATACTCTAGTAACCTCATTACACCACTGTGGATTCTCAAAACAGCTAAGGAGAAACAAGTGCAAAGGCTTGTTAACATGTCTGTTGATTTGGCAAGACAAGTTGGCTTGATGCTTGAAGACATTTCAGGGAAGGAAGTAGTGAAGCAAAAGGTCCATGACAATCATCAGGGCAGTAAAAGTGAAATTGGTTACAAAGAAAGACAACAAATTGTAAATTCAGCAAAAAATGGTGTTAGAAGTCGCCGTGGTCGTCGAATGCAGACATGTCAGACTCCAATCCGTCCGATAACACCTAACAGCCTTCTGGACTCAATCTGCTGGTCAATATCAGAGTCAACTTCAACTGCTTCCATTTACACAGACTCTTTCAGTGCTGAAGATCCTAATGAAAATCATACGTCAATATTTTTTGATGCAAAAGGCGATGGAAAGGATCCAGATGCTTCGTTTTCAAACTCCACACGTCCGCTAGCAGAAAGTGAGAAATCTGAATTGATATTTAAAAACCATTTTCTCACCATACTCTTCCCTATGGACCGGTTTTCCGAGATCGGCCCTTCCTCAAGAACGTTTTTCAGCCATAACGGATTTACGTGTCTTCAGGTGTTGGATCATATCTATTCATTTTATCAGGAGAACATGTCAAGCCATGAAATAGAAGTGGCAATTCATACAGATTCAAGACACGCGGATAGGCTTCGATCAGTGTACTCAAGTAAAGAAACAACGGAACATGGGTTTGTGATATTCAAACGAATTGAATTTTTGGGTAGTCGTACAAGTTTTGAAATGTTGAAGCGTGTGAGTGGAGACAACAACTCAAATGTGTATGAGTTATTACTTAGGGCGTAA 1587 0.4064 MGGEGRVEVVSDNGCSRLFSSSIRNLQPLDQMSPVSSSLQLSSNAPFAGLVICVTGLSKEARNQVMEATVRLGGQYSPNLHPQCTHLVHSFGGRKFEHALKHGAKNCLFVVTLGWFVDSVRKNVRLTESLYSLKSYGDNKMNLDDFRLLPGYTNAGNCLPARIHETNHTHAEEFRRFSGRETKGSLESTLSGCSIYVDPGISSELQKKVVETASREGASLVEQWFVGCNVSHVVTEGTSIQRYLGYSSNLITPLWILKTAKEKQVQRLVNMSVDLARQVGLMLEDISGKEVVKQKVHDNHQGSKSEIGYKERQQIVNSAKNGVRSRRGRRMQTCQTPIRPITPNSLLDSICWSISESTSTASIYTDSFSAEDPNENHTSIFFDAKGDGKDPDASFSNSTRPLAESEKSELIFKNHFLTILFPMDRFSEIGPSSRTFFSHNGFTCLQVLDHIYSFYQENMSSHEIEVAIHTDSRHADRLRSVYSSKETTEHGFVIFKRIEFLGSRTSFEMLKRVSGDNNSNVYELLLRA* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0997 528 ProSiteProfiles BRCT domain profile. 42 133 IPR001357 -
Mal2g0997 528 ProSiteProfiles BRCT domain profile. 185 273 IPR001357 -
Mal2g0997 528 SMART BRCT_7 44 123 IPR001357 -
Mal2g0997 528 SMART BRCT_7 187 263 IPR001357 -
Mal2g0997 528 Pfam twin BRCT domain 50 104 IPR001357 -
Mal2g0997 528 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 3 528 - -
Mal2g0997 528 SUPERFAMILY BRCT domain 41 134 IPR036420 -
Mal2g0997 528 CDD BRCT_TopBP1_rpt2_like 46 123 - -
Mal2g0997 528 Gene3D BRCT domain 45 135 IPR036420 -
Mal2g0997 528 Pfam Family of unknown function (DUF6699) 429 512 IPR046522 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0997 46 133 Core DNA Replication Machinery Family AT1G77320 37.079 7.22e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0997 - - gmx:100815253 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0997 2 11727050 11730858 Mal2g0997 2 11727050 11730858 ECH