Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0993 ATGGATCAAATTAATATCCCATTGTCATCATCTTCTTGTTCTAGTGGTAATGATACTAATGATAATAATAATAAGAAGAAGAAGATGTACAAAGGAGTGAGATTGAGAAAGTGGGGAAAATGGGTATCTGAAATAAGGCTACCAAATAGCCGTGAAAGAATATGGTTAGGATCATATGATTCAGCTGAGAAAGCAGCTAGAGCATTTGATGCTGCACTTTACTGTCTCCGTGGTCGACATGCAACATTCAATTTTCCTGATACACCTTTCCATTTGGATATCAATAATGTATCTGCAGCTTGTAACAATTCTCTTACACATCAACAGATTCGAGAGGTTGCTGCGAATTTCGCCAAAATTTGTCCACCAATTATTGATAATAATAATAATAATAATAATGGTAATGCTCTTCAATCCAATATCGTGACGGAAATTAGTGGCTCTTCATCTTCTACTACTATGTATGATAATGAGAGCACGATTGATTGGACATTTTTGAACATGTTGGATGGTTCAAGTACTCATGATGCTAATTTTGTTGGGTCTGAAAATATTGGTGGTTTCTATTCTGACTTAGAAAAGATGCATTCGGGTGAGTTAATATATTCCATTCCACCACTGATTTTTGAGGATAATCAGAACGAATTAGTTGAAGGCCATGATGATGTTGATGATGACCCATTTTCTCATCAACCAATCCTTTGGAACTGGAACTTCTGA 720 0.3569 MDQINIPLSSSSCSSGNDTNDNNNKKKKMYKGVRLRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALYCLRGRHATFNFPDTPFHLDINNVSAACNNSLTHQQIREVAANFAKICPPIIDNNNNNNNGNALQSNIVTEISGSSSSTTMYDNESTIDWTFLNMLDGSSTHDANFVGSENIGGFYSDLEKMHSGELIYSIPPLIFEDNQNELVEGHDDVDDDPFSHQPILWNWNF* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0993 239 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Mal2g0993 239 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 11 239 - -
Mal2g0993 239 MobiDBLite consensus disorder prediction 1 20 - -
Mal2g0993 239 CDD AP2 30 88 IPR001471 GO:0003700|GO:0006355
Mal2g0993 239 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Mal2g0993 239 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 239 - -
Mal2g0993 239 Pfam AP2 domain 30 78 IPR001471 GO:0003700|GO:0006355
Mal2g0993 239 Gene3D AP2/ERF domain 28 87 IPR036955 GO:0003700|GO:0006355
Mal2g0993 239 MobiDBLite consensus disorder prediction 1 28 - -
Mal2g0993 239 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Mal2g0993 239 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Mal2g0993 239 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0993 Mal-Chr2 11677783 11678502 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0993 30 199 AP2-EREBP Transcription Factor Family AT1G19210 47.647 4.18e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal2g0993 AP2 2.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0993 - - mtr:MTR_3g105510 316.62