Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0992 ATGGATAATCAACTCACCACTCATCAAATTAAAACTCCATCATCATCATCATCATCTTCTACTTCAAATGGTAATAATGATAATAATAAGAAGAAGAAGATGTACAAAGGAGTGAGATTGAGAAAGTGGGGAAAATGGGTATCTGAAATAAGGCTACCAAATAGCCGTGAAAGAATATGGTTAGGATCATATGATTCAGCTGAGAAAGCAGCTAGAGCATTTGATGCTGCACTTTACTGTCTCCGTGGTCGACATGCAACATTCAATTTTCCTGATACACCTTTCCATTTGGATATCAATAATGTATCTGCAGCTTGTAACAATTCTCTTACACATCAACAGATTCGAGAGGTTGCTGCGAATTTCGCCAAAATTTGTCCACCAATTATTGATAATAATAATAATGGTAATGTTCAATCCAATATCGCGACGGAAATTAGTGGCTCTTCATCTTCTACTACTATGTATGATAATGGAAACGCGATAGATTGGACATTTTTGAACATGTTGGATGGTACAAGTACTCATGAAGCTAATTTTGTTGGGTCTGAAAATTATGGTCTATTGTACTCTGACCTAGACAAGATGCATTCGGGTGAGTTAATGTATTCCATTCCACCACCACTTTTTGAGGATTATCAGAACGAGTTACTAGTTGAAGGCAATGATGATGATTATGACGATTCTTTTTCTCATCAATCATTCCTTTGGAACTGGAACTTCTGA 726 0.3636 MDNQLTTHQIKTPSSSSSSSTSNGNNDNNKKKKMYKGVRLRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALYCLRGRHATFNFPDTPFHLDINNVSAACNNSLTHQQIREVAANFAKICPPIIDNNNNGNVQSNIATEISGSSSSTTMYDNGNAIDWTFLNMLDGTSTHEANFVGSENYGLLYSDLDKMHSGELMYSIPPPLFEDYQNELLVEGNDDDYDDSFSHQSFLWNWNF* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0992 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 16 241 - -
Mal2g0992 241 Gene3D AP2/ERF domain 33 92 IPR036955 GO:0003700|GO:0006355
Mal2g0992 241 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Mal2g0992 241 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Mal2g0992 241 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
Mal2g0992 241 CDD AP2 37 93 IPR001471 GO:0003700|GO:0006355
Mal2g0992 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 241 - -
Mal2g0992 241 Pfam AP2 domain 35 83 IPR001471 GO:0003700|GO:0006355
Mal2g0992 241 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Mal2g0992 241 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Mal2g0992 241 MobiDBLite consensus disorder prediction 1 28 - -
Mal2g0992 241 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0992 Mal-Chr2 11672834 11673559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0992 35 239 AP2-EREBP Transcription Factor Family AT1G19210 43.961 6.29e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal2g0992 AP2 2.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0992 - - mtr:MTR_3g105510 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0992 2 11672834 11673559 Mal2g0992 2 11672834 11673559 ECH