Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0986 ATGGACAAAGAGTGTGTTGATGATATTATGGAAATTGAAGTCCTTCCTTCAATGTGGCCAGAAGATATTGGAACTGATGTTGGAAAGCAGTTCAATATAGAAAAGCCAGGAAATAACCAAGACATGTTAGAAGAAGTTACAATCATAGATGAAGTTACAACTATAGCTGATTTCAAACGCCTCATTGAGCTCACAAATTTCACTGAAAAGGGTTCTTCTCAATTAGCCTACCTTATGAAACACTGGGAGTATAAGCAGGCGAATGTGGCACGTCTTCTAAGAGAAGAACTCGACAACCTAAGCAAACAAAGACAAGATGTTGAGCTAAGGAAGTTGGAGATATTGGAAGAGCATAGATTCGAGGAAGAAAGATATGGCGGTGATAAACGACCGGTTTCTATATTGGACGATATTTATGATATATGGCAACAAGATGTACCTTGTAGAAAAAGTAATGTTGTGGTTCATAACAAGAGAATTGAAATTGATGCTGAGTTTGATACTGTTGTGTACTGGAAACAGCGAGCCGCGCACTTGGAAAAGCTGCTAGAGGCAAGTATCATGAGAGAAGAGATACTTGAACAAAAGCTGCAAGAAAGTATCAAGAACATTGAAAGACAATCATCACCTGTTGAAGAACTCTCTCAGATTTTGAAAAGAGCTGATAATTTTTTGCATTTTATACTCCAAAATGCTCCTGTTGTTATTGGCCATCAGGACAAAGAGTTGCGCTATCGCTTTATCTATAATCACTTTCCAAGTTTACATGAGGAGGACATAATAGGAAAAACCGATGTCGAAATATTCACTGGATCTGGTGTTAAGGAGAACCAAGATTTTAAGAGGGAAGTTTTGGAAAAAGGATTGCCTGCAAAAAGGGAAATCACATTTGAGACAGAACTATTTGGATCAAAGACATTCTTGATTTATGTAGAACCTGTCTTCAGCAAGGCAGGGGAAACAATTGGAATCAATTACATGGGAATGGATGTAACAGATCAGGTGAGAAAAAGAGAAAGGATGGCGAAGATTCGCGAAGAGATAGCTGTTCAGAAAGCCAAGGAAACAGAATTGAATAAAACTATTCGTATTACAGAGGAAACTATGCGAGCAAAACAAGTGCTGGCAACAATGTCACATGAGATAAGATCACCACTGTCTGGAGTTGTTAGCATGGCTGAAATTCTTTCCACCACAAAACTTGAAAAGGAGCAAAGACAGCTCTTGGATGTCATGTTATCATCAGGAGATTTGGTACTTCAACTTATAAATGACATACTTGATCTTTCCAAGGTTGAGTCAGGAGTTATGAAGTTGGAAGCTACAAAATTTCGACCAAGAGAGGTAGTAAAGCATGTGCTTCAGACAGCTGCAGCATCATTGCAGAAACGATTAACCTTAGAAGGACATGTAGCAGATGATGTACCTATTGAGGTCATCGGTGATGTTTTAAGGATTCGGCAAATTCTCACAAATTTAATCAGCAATGCCATCAAATTTACAGATGAAGGCAAAGTAGGGATAAACCTTTATGTTATGCAAGAGCCAAGTTTTACAAAAGCTGAAAGCATACAAAATATTAGTTCAGGGCATTCAACCATTTCTGTGAATGTAGTGAAAGAAGAAAAATATGGAGTTAATGATGCGTGTAGATCTCCGGTTAAAAGTGAATGCTCGATGAATGGAGACACAGATGATCAACATCACTCAACTGAAACAACAGTGTGGATAGGTTGTGATGTATATGATACAGGCATTGGAGTACCAGAAAATGCAATACATAGTTTATTCAAAAGGTACATGCAAGTCAGTGCAGATCACGCTCGAAAGTATGGTGGCACAGGGCTAGGACTAGCAATATGCAAACAACTGGTTGAGTTGATGGGAGGTCGTTTAACAGTGTATAGCAAAGAACAACATGGTTCTACCTTCACATTCATACTCCCATACAAGGTCTCGATCGCTTGCGATAGTTCTGATTACTCAGATGAACTCTCAGACATGGAGCATAATGATGCAGCTTCTGATGATACAACAACAGAAGGTTTCTTCCAATTCCAACCACCGACTTTAGGCTCACCATTATCCCCTAACGGAACAAATAGAACTCACAAGTTATTGCCACACAAATTTAGTGGATTTTCTGAGACTTCATTCTCATTTCCCTTTACTTCTAATGACATCATGTCAAAAGGAACATGTTCATTTGGTGATTCATCTTCAGTTGTTGATGCTTCAGATATGTCTGAATCAGCTAGTTCATCTAGTCACAAACATCATCTATATAATGCTCATGCATGGTTCCAGAATGGTATTGCAGATTCTTCTCAGCATATGGTGGTAAACTCAACTACTCAATGTGTTACTAGCAGTAGTAAATCAGACATAACCAAATCCATATCAAAGCCTAAGATCCTTCTTGTAGAAGATAACAAGATTAACATCATGGTGACACAATCCATGATGAAACTGTTGGGTCATAACATAGATATTGTCAATAACGGAGCAGAGGCGGTGCGCGCGGTTCAACGGTGTACATATGACTTGGTTCTGATGGATGTGTGCATGCCGATTATGGATGGTCTTCAAGCAACAAAACTGATTCGGTCTTTCGAGGAAACAGGCAATTGGGATGCTGCGAAAAATGCCGGAATCGAGCAAAGTCTACCCGATCGAGATTATGAATATTCTGCTCCATCTACAAAGCGAGTTCCCATTGTTGCGATGACAGCAAATGCTTTGTCAGAGAGTGCTGAAGAGTGTTTTGCTAATGGTATGGACTCATTTCTGTCAAAACCTGCGAGTTTACAAAAATTGAAAGAGTGTATTGAGCAATACTTAAGGTGA 2847 0.3909 MDKECVDDIMEIEVLPSMWPEDIGTDVGKQFNIEKPGNNQDMLEEVTIIDEVTTIADFKRLIELTNFTEKGSSQLAYLMKHWEYKQANVARLLREELDNLSKQRQDVELRKLEILEEHRFEEERYGGDKRPVSILDDIYDIWQQDVPCRKSNVVVHNKRIEIDAEFDTVVYWKQRAAHLEKLLEASIMREEILEQKLQESIKNIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLHEEDIIGKTDVEIFTGSGVKENQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMAKIREEIAVQKAKETELNKTIRITEETMRAKQVLATMSHEIRSPLSGVVSMAEILSTTKLEKEQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKRLTLEGHVADDVPIEVIGDVLRIRQILTNLISNAIKFTDEGKVGINLYVMQEPSFTKAESIQNISSGHSTISVNVVKEEKYGVNDACRSPVKSECSMNGDTDDQHHSTETTVWIGCDVYDTGIGVPENAIHSLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVYSKEQHGSTFTFILPYKVSIACDSSDYSDELSDMEHNDAASDDTTTEGFFQFQPPTLGSPLSPNGTNRTHKLLPHKFSGFSETSFSFPFTSNDIMSKGTCSFGDSSSVVDASDMSESASSSSHKHHLYNAHAWFQNGIADSSQHMVVNSTTQCVTSSSKSDITKSISKPKILLVEDNKINIMVTQSMMKLLGHNIDIVNNGAEAVRAVQRCTYDLVLMDVCMPIMDGLQATKLIRSFEETGNWDAAKNAGIEQSLPDRDYEYSAPSTKRVPIVAMTANALSESAEECFANGMDSFLSKPASLQKLKECIEQYLR* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0986 948 Gene3D - 436 655 IPR036890 -
Mal2g0986 948 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 650 IPR003594 -
Mal2g0986 948 SMART REC_2 803 943 IPR001789 GO:0000160
Mal2g0986 948 SMART HisKA_10 370 435 IPR003661 GO:0000155|GO:0007165
Mal2g0986 948 CDD HisKA 369 431 IPR003661 GO:0000155|GO:0007165
Mal2g0986 948 Gene3D - 354 435 - -
Mal2g0986 948 Coils Coil 90 117 - -
Mal2g0986 948 Pfam His Kinase A (phospho-acceptor) domain 373 435 IPR003661 GO:0000155|GO:0007165
Mal2g0986 948 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 562 947 - -
Mal2g0986 948 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 1 541 - -
Mal2g0986 948 ProSiteProfiles Response regulatory domain profile. 804 947 IPR001789 GO:0000160
Mal2g0986 948 ProSiteProfiles Histidine kinase domain profile. 377 652 IPR005467 -
Mal2g0986 948 SMART HKATPase_4 481 652 IPR003594 -
Mal2g0986 948 Pfam Response regulator receiver domain 805 872 IPR001789 GO:0000160
Mal2g0986 948 CDD REC_hyHK_CKI1_RcsC-like 805 943 - -
Mal2g0986 948 Coils Coil 187 207 - -
Mal2g0986 948 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 424 650 IPR036890 -
Mal2g0986 948 PRINTS Bacterial sensor protein C-terminal signature 577 591 IPR004358 GO:0016310|GO:0016772
Mal2g0986 948 PRINTS Bacterial sensor protein C-terminal signature 612 630 IPR004358 GO:0016310|GO:0016772
Mal2g0986 948 PRINTS Bacterial sensor protein C-terminal signature 636 649 IPR004358 GO:0016310|GO:0016772
Mal2g0986 948 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 1 541 - -
Mal2g0986 948 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 562 947 - -
Mal2g0986 948 SUPERFAMILY CheY-like 801 948 IPR011006 -
Mal2g0986 948 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 366 435 IPR036097 GO:0000155|GO:0007165
Mal2g0986 948 CDD HATPase_EvgS-ArcB-TorS-like 486 649 - -
Mal2g0986 948 Gene3D PAS domain 209 347 - -
Mal2g0986 948 Gene3D - 797 948 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0986 Mal-Chr2 11622483 11626978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0986 10 947 Histidine Kinase Gene Family AT5G10720 59.081 0.0 1088
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal2g0986 HATPase_c 3.3e-26 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0986 - - gmx:100811117 1432.93