Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0968 ATGGCATCTAAACTCTGTGACTCATGCAAATCCGCCACCGCCACTCTCTACTGCCGCCCTGACTCCGCCTTCCTCTGCGGCGCCTGTGACTCCAAAGTTCATGCCGCTAACAAACTCGCCTCCCGTCACCCTCGCGTCACTCTCTGCGAAGTCTGCGAACAAGCACCTGCACACGTCACCTGTAAAGCCGATGCAGCTTCTCTCTGCATCACCTGCGATCGTGACATCCACTCTGCTAATCCTCTCGCCGCACGTCACGAGCGTGTTCCCGTTACTCCTTTCTTCGAATCCAACACTTCTCACTCCGTTAAATCGCTTCACAATAACAATAACAATAACAACTACGATGCTGTTAAAGATGAAGCTGAAGCTGCTTCGTGGTTAATCTCTGATCCGAAAGCAGATCTCAACTCTTCTCCTTATCTTTTCTCTGATTCCGAAGCTATTCCGTTCATGGATCTTGATTACGGTGTTATTGAACATAAAAACGACGGTGTAGTTCCCGTTCACGGTAACTTCGATCCTTCTGTTTCTGCTTACAAGAACAACATGCAGTTGCATACAGAGTTAGAAACACCGTCACAGTCACAGATTAGTCAGAGTGTTTCATCGTCATCGATGGAGGTTGGAGTTGTTCCGGACGGAACCACCGTATCGGAGATATCAAACTGTGGTTATGGAACGGTGGCGGCGGATCGTGAAGCTAGGGTTATGAGGTATAGAGAGAAGAGGAAGAATCGAAGGTTCGAGAAGACAATTCGATTTTTGCCCATGTTTGGAAAAGCCCGGCCCCGTCGAAGGTGGTGGCTCTTTCGTGGAAGCTTTTCTTAG 831 0.4886 MASKLCDSCKSATATLYCRPDSAFLCGACDSKVHAANKLASRHPRVTLCEVCEQAPAHVTCKADAASLCITCDRDIHSANPLAARHERVPVTPFFESNTSHSVKSLHNNNNNNNYDAVKDEAEAASWLISDPKADLNSSPYLFSDSEAIPFMDLDYGVIEHKNDGVVPVHGNFDPSVSAYKNNMQLHTELETPSQSQISQSVSSSSMEVGVVPDGTTVSEISNCGYGTVAADREARVMRYREKRKNRRFEKTIRFLPMFGKARPRRRWWLFRGSFS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0968 276 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 1 258 IPR045281 GO:0009909
Mal2g0968 276 CDD Bbox1_BBX-like 5 48 - -
Mal2g0968 276 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270
Mal2g0968 276 SMART bboxneu5 1 48 IPR000315 GO:0008270
Mal2g0968 276 SMART bboxneu5 49 91 IPR000315 GO:0008270
Mal2g0968 276 ProSiteProfiles Zinc finger B-box type profile. 44 91 IPR000315 GO:0008270
Mal2g0968 276 CDD Bbox1_BBX-like 48 91 - -
Mal2g0968 276 Pfam B-box zinc finger 4 47 IPR000315 GO:0008270
Mal2g0968 276 Pfam B-box zinc finger 46 91 IPR000315 GO:0008270
Mal2g0968 276 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 3 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0968 Mal-Chr2 11269416 11270900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0968 1 265 C2C2-CO-like Transcription Factor Family AT5G24930 50.602 5.57e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mal2g0968 zf-B_box 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0968 - - mtr:MTR_3g105710 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0968 2 11269416 11270900 Mal2g0968 2 11269416 11270900 ECH