Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0937 ATGGATGATTCCGGTGACCGGTTTCCCATCGGAATGCGTGTTCTCGCCGTCGACGACGATCCCACTTGTCTCTTGGTTTTGGAAACTCTTCTCCGAAGATGTCAATACCACGTAACCACAACTAGTCAAGCAATAACGGCGTTGACTATGTTGAGAGAAAACAGAGACAAGTTTGACCTGGTAATCAGTGATGTGCACATGCCCGACATGGATGGATTTAAGCTGCTCGAACTTGTGGGACTTGAAATGGACCTTCCTGTCATAATGTTGTCTGCATATGGTGATAAAAAGTTGGTGATGAAGGGAATTTCCCACGGTGCCTGTGATTATCTGCTGAAACCTGTGAGATTAGAGGAGCTAAAGAACATTTGGCAGCATGTAATTAGGAAGAAGAAGTCTGATCCGAAGGAGAAAAACAAAACCAGCAAACCAGACAAAACTACTTCTGATAGTGGCAGTGGACTAAGATCAGCAGGAGCAGAAAATTCAGATGAAAATGGAAAGCTGACTAAGAAAAGAAAGGATCAGGATGAAGATGAAGATGAGGATAAAGAGAATGGTAACGACAATGAGGACCCATCAGCTCAGAAGAAGCCCCGGGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGACAAGGCTGTACCCAAAAAAATTCTTGATATGATGAATGTCGAAAATATTACAAGGGAGAACGTGGCGAGCCATCTCCAGAAGTATAGACTTTATCTGAAAAGAATTAGCTGTGTGGCCAACCAACAAGCTAGTATGGTGGCAGCCTTAGGGAGTGCAGATCAATCTTATTTGAGAATGGGTGGTTCTGGACATTTTCACAATAATGCTTTCAGATCCTTTTCACCTAGTGGGATAATTGGTAATCTGAACACTCCAGCTAGTCTTAACGGGCACGGATTTTCTCCTTCTGGACTACTTCAGTTGGGCCAATCACGTAATTTAAACAATTCTTCCAATGATCAACTTAAATTCCAGTCGGCTATAACTCCCGTTAATCAGAATATTCTTCAGGGAATGCCAATGTCCATAGGATTTGATCACTTGCAAAACAGCAAGGGTGTTATTTCTGTTCAAAACCTGAATACTGATGTGAAAACAACTTTTCCCATCCCAAATAAATTTCCGGATCAAAGACCAAGTTTTGCCACCTCTAATTCTCACCCCCCAAGTCTCGGTATCTCAAACAATGGCTTGATGTTGGAAACACACCCTGAAAGAAAACACGGAGGTATAGGAATAGGATATGGAAGTTCATCTTCTTCAGTAGCCTCTCAACATTCAGAATTTTCTTTCTCTATGCTGGATCAAGGTAGGCACAATGATAATTGGTCAAGCGACGTGCCATTATCTGGAATCCAAACAAATTCTTTCCCTTCAAGTGAATGTTTTAGACATACAACTGTTCCTCCTTCAGATAACATGGCTTCTTTGCCCTTGCAAGCGGGGTATCCTGGTGGTTCATTGGCAGATATGCACTCCCAAGGAATGATTTTTACTAATCCAACCGAGTATATAAACGGTAATTTGCCATTTCAAGGATGGGAAGACCGTAATCAGGATGCTACTTACCACTCAAATGTTACTTGTGGATCAATGAACTCTCTTGCTCCAGTTAACGGTGCTGTTGTTCCACCAGGCCAAACAACATCTAGCTCGACCATGGATACTAAATTTTTTAATCCCATACAAATGAAACATGCTGGATTTGCTGAGTTAACTGAATGCAGCTCATCAAGACAGCCTCCAGCAAATATCATAAGCCAGCAGAAGTTTTCTAATAATCTTGGTTCACTGGAATACTTGGCTAGTTCAATGATGGGACAGGAGCAAGATAAGATGAAATTATTGGGTGGAGACTTCATATGCGATAATTACTCCGACGGGGTATCTTTGTGA 1938 0.4205 MDDSGDRFPIGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQAITALTMLRENRDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDKKLVMKGISHGACDYLLKPVRLEELKNIWQHVIRKKKSDPKEKNKTSKPDKTTSDSGSGLRSAGAENSDENGKLTKKRKDQDEDEDEDKENGNDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVENITRENVASHLQKYRLYLKRISCVANQQASMVAALGSADQSYLRMGGSGHFHNNAFRSFSPSGIIGNLNTPASLNGHGFSPSGLLQLGQSRNLNNSSNDQLKFQSAITPVNQNILQGMPMSIGFDHLQNSKGVISVQNLNTDVKTTFPIPNKFPDQRPSFATSNSHPPSLGISNNGLMLETHPERKHGGIGIGYGSSSSSVASQHSEFSFSMLDQGRHNDNWSSDVPLSGIQTNSFPSSECFRHTTVPPSDNMASLPLQAGYPGGSLADMHSQGMIFTNPTEYINGNLPFQGWEDRNQDATYHSNVTCGSMNSLAPVNGAVVPPGQTTSSSTMDTKFFNPIQMKHAGFAELTECSSSRQPPANIISQQKFSNNLGSLEYLASSMMGQEQDKMKLLGGDFICDNYSDGVSL* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0937 645 MobiDBLite consensus disorder prediction 165 179 - -
Mal2g0937 645 Pfam Myb-like DNA-binding domain 200 250 IPR001005 -
Mal2g0937 645 MobiDBLite consensus disorder prediction 130 145 - -
Mal2g0937 645 SUPERFAMILY CheY-like 11 132 IPR011006 -
Mal2g0937 645 Pfam Response regulator receiver domain 14 122 IPR001789 GO:0000160
Mal2g0937 645 SUPERFAMILY Homeodomain-like 196 255 IPR009057 -
Mal2g0937 645 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 620 IPR045279 GO:0009736
Mal2g0937 645 PIRSF RR_ARR_type-B 1 643 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mal2g0937 645 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 251 IPR006447 GO:0003677
Mal2g0937 645 MobiDBLite consensus disorder prediction 146 164 - -
Mal2g0937 645 MobiDBLite consensus disorder prediction 130 200 - -
Mal2g0937 645 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 5 620 - -
Mal2g0937 645 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 254 IPR017930 -
Mal2g0937 645 SMART REC_2 12 124 IPR001789 GO:0000160
Mal2g0937 645 Gene3D - 11 148 - -
Mal2g0937 645 Gene3D - 194 257 - -
Mal2g0937 645 CDD REC_typeB_ARR-like 14 128 - -
Mal2g0937 645 ProSiteProfiles Response regulatory domain profile. 13 128 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0937 Mal-Chr2 10891633 10895630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0937 6 419 Response Regulator Gene Family AT2G25180 52.982 1.39e-129 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mal2g0937 Response_reg 1e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0937 - K14491 gmx:100809002 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5586 1 131581787 131584500 Mal2g0937 2 10891633 10895630 PCT