Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0925 ATGGCGTATCACAACCAAGATAACCCACTCCACCATTTCACAGACCAACAACAACAACAACCAACTTGGCTCAACAACGCCCTTCTTCGCAACATCGAAACTAACGTCAACGTCAACGTCAACGCCACCACCAACAACAGTACTAATTTCCTCAACCTCGACACCGCCGGAGCTTCCCAATCCTCCGGTCAATGGCTATCCCGTCCTATCCTCCACCGTAACCACAGCGAGGTCATCGATGACGTCGCTGGTGCTGGTGCTGGTTTGAAGGCGGAGGAAAGCGGGGAGGTAACGGCGGAGGGAGTGATGAACTGGCAGAAAGCGAAATACAAAGGTGAAATAATGGCGCATCCGTTGTATGAACAGCTACTATCAGCACACGTGTCATGTTTGAGAATCGCCACGCCGGTTGACCAGTTGCCGAGGATCGATGCTCAGCTGGCAGAGTCACAGAATGTTGTTGCCAAGTACTCTGCCTTAGGACAACAGGGCATGCTTCATGAACTTGATAATAAACAACTCGACCACTTCATGTCGCACTATGTTTTGTTGCTTTGTTCGTTCAAAGAACAGCTCCAACAACATGTCCGAGTCCATGCAATGGAAGCAGTAATGGCTTGTTGGGAGATTGAACAGTCCTTACAAAGTCTAACAGGAGTTTCACCGGGGGAAGGTACAGGAGCAACAATGTCTGAAGATGAAGATGAGCAAGTAGACAGTGATGTTAATCTGTTTGATGGAGGTTTGGATGGTTCAGATAATAGCATGGGAGGATTTGGTCCTCTTGTTCTCACAGAGAATGAGAGGTCCCTCATGGAACGTGTAAGACATGAATTAAAGCATGAGTTGAAACAGGGTTATAAAGAGAAAATTGTGGACATAAGAGAGGAAATTTTACGCAAGAGACGAGCTGGGAAACTTCCGGGTGACACGACCTCAGTACTTAAAGATTGGTGGCAATCACATTCAAAGTGGCCTTATCCAACTGAGGAGGATAAGGCAAGATTGGTGCAAGAAACTGGTTTGCAATTGAAACAGATTAATAACTGGTTTATCAATCAAAGGAAGAGGAACTGGCACAGCAATCCTTCAACTTCTAATGTGTTGAAGAGCAAGCGCAAGAGTAATGCAGGTGATAAAAGTGATGGTCGTTACATGTAA 1161 0.4617 MAYHNQDNPLHHFTDQQQQQPTWLNNALLRNIETNVNVNVNATTNNSTNFLNLDTAGASQSSGQWLSRPILHRNHSEVIDDVAGAGAGLKAEESGEVTAEGVMNWQKAKYKGEIMAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAESQNVVAKYSALGQQGMLHELDNKQLDHFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSEDEDEQVDSDVNLFDGGLDGSDNSMGGFGPLVLTENERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKDWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSNVLKSKRKSNAGDKSDGRYM* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0925 386 MobiDBLite consensus disorder prediction 358 372 - -
Mal2g0925 386 CDD homeodomain 301 362 IPR001356 GO:0003677
Mal2g0925 386 SUPERFAMILY Homeodomain-like 300 364 IPR009057 -
Mal2g0925 386 PANTHER CLASS II KNOTTED-LIKE HOMEOBOX PROTEIN 14 375 - -
Mal2g0925 386 SMART ELK_2 278 299 IPR005539 GO:0003677
Mal2g0925 386 MobiDBLite consensus disorder prediction 358 386 - -
Mal2g0925 386 SMART KNOX2_2 164 219 IPR005541 GO:0003677|GO:0005634
Mal2g0925 386 SMART HOX_1 300 365 IPR001356 GO:0003677
Mal2g0925 386 SMART KNOX1_2 108 152 IPR005540 GO:0003677|GO:0005634
Mal2g0925 386 Pfam Homeobox KN domain 318 357 IPR008422 GO:0003677|GO:0006355
Mal2g0925 386 Gene3D - 300 378 - -
Mal2g0925 386 Pfam KNOX1 domain 110 151 IPR005540 GO:0003677|GO:0005634
Mal2g0925 386 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 14 375 - -
Mal2g0925 386 ProSiteProfiles 'Homeobox' domain profile. 298 361 IPR001356 GO:0003677
Mal2g0925 386 Pfam ELK domain 278 299 IPR005539 GO:0003677
Mal2g0925 386 Pfam KNOX2 domain 170 218 IPR005541 GO:0003677|GO:0005634
Mal2g0925 386 ProSiteProfiles ELK domain profile. 278 298 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0925 Mal-Chr2 10682119 10685833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0925 1 374 Homeobox Transcription Factor Family AT5G25220 63.158 1.65e-180 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Mal2g0925 KNOX2 6.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0925 - - gmx:100810257 569.696