Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal2g0925 | ATGGCGTATCACAACCAAGATAACCCACTCCACCATTTCACAGACCAACAACAACAACAACCAACTTGGCTCAACAACGCCCTTCTTCGCAACATCGAAACTAACGTCAACGTCAACGTCAACGCCACCACCAACAACAGTACTAATTTCCTCAACCTCGACACCGCCGGAGCTTCCCAATCCTCCGGTCAATGGCTATCCCGTCCTATCCTCCACCGTAACCACAGCGAGGTCATCGATGACGTCGCTGGTGCTGGTGCTGGTTTGAAGGCGGAGGAAAGCGGGGAGGTAACGGCGGAGGGAGTGATGAACTGGCAGAAAGCGAAATACAAAGGTGAAATAATGGCGCATCCGTTGTATGAACAGCTACTATCAGCACACGTGTCATGTTTGAGAATCGCCACGCCGGTTGACCAGTTGCCGAGGATCGATGCTCAGCTGGCAGAGTCACAGAATGTTGTTGCCAAGTACTCTGCCTTAGGACAACAGGGCATGCTTCATGAACTTGATAATAAACAACTCGACCACTTCATGTCGCACTATGTTTTGTTGCTTTGTTCGTTCAAAGAACAGCTCCAACAACATGTCCGAGTCCATGCAATGGAAGCAGTAATGGCTTGTTGGGAGATTGAACAGTCCTTACAAAGTCTAACAGGAGTTTCACCGGGGGAAGGTACAGGAGCAACAATGTCTGAAGATGAAGATGAGCAAGTAGACAGTGATGTTAATCTGTTTGATGGAGGTTTGGATGGTTCAGATAATAGCATGGGAGGATTTGGTCCTCTTGTTCTCACAGAGAATGAGAGGTCCCTCATGGAACGTGTAAGACATGAATTAAAGCATGAGTTGAAACAGGGTTATAAAGAGAAAATTGTGGACATAAGAGAGGAAATTTTACGCAAGAGACGAGCTGGGAAACTTCCGGGTGACACGACCTCAGTACTTAAAGATTGGTGGCAATCACATTCAAAGTGGCCTTATCCAACTGAGGAGGATAAGGCAAGATTGGTGCAAGAAACTGGTTTGCAATTGAAACAGATTAATAACTGGTTTATCAATCAAAGGAAGAGGAACTGGCACAGCAATCCTTCAACTTCTAATGTGTTGAAGAGCAAGCGCAAGAGTAATGCAGGTGATAAAAGTGATGGTCGTTACATGTAA | 1161 | 0.4617 | MAYHNQDNPLHHFTDQQQQQPTWLNNALLRNIETNVNVNVNATTNNSTNFLNLDTAGASQSSGQWLSRPILHRNHSEVIDDVAGAGAGLKAEESGEVTAEGVMNWQKAKYKGEIMAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAESQNVVAKYSALGQQGMLHELDNKQLDHFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSEDEDEQVDSDVNLFDGGLDGSDNSMGGFGPLVLTENERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKDWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSNVLKSKRKSNAGDKSDGRYM* | 387 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal2g0925 | 386 | MobiDBLite | consensus disorder prediction | 358 | 372 | - | - | |
Mal2g0925 | 386 | CDD | homeodomain | 301 | 362 | IPR001356 | GO:0003677 | |
Mal2g0925 | 386 | SUPERFAMILY | Homeodomain-like | 300 | 364 | IPR009057 | - | |
Mal2g0925 | 386 | PANTHER | CLASS II KNOTTED-LIKE HOMEOBOX PROTEIN | 14 | 375 | - | - | |
Mal2g0925 | 386 | SMART | ELK_2 | 278 | 299 | IPR005539 | GO:0003677 | |
Mal2g0925 | 386 | MobiDBLite | consensus disorder prediction | 358 | 386 | - | - | |
Mal2g0925 | 386 | SMART | KNOX2_2 | 164 | 219 | IPR005541 | GO:0003677|GO:0005634 | |
Mal2g0925 | 386 | SMART | HOX_1 | 300 | 365 | IPR001356 | GO:0003677 | |
Mal2g0925 | 386 | SMART | KNOX1_2 | 108 | 152 | IPR005540 | GO:0003677|GO:0005634 | |
Mal2g0925 | 386 | Pfam | Homeobox KN domain | 318 | 357 | IPR008422 | GO:0003677|GO:0006355 | |
Mal2g0925 | 386 | Gene3D | - | 300 | 378 | - | - | |
Mal2g0925 | 386 | Pfam | KNOX1 domain | 110 | 151 | IPR005540 | GO:0003677|GO:0005634 | |
Mal2g0925 | 386 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 14 | 375 | - | - | |
Mal2g0925 | 386 | ProSiteProfiles | 'Homeobox' domain profile. | 298 | 361 | IPR001356 | GO:0003677 | |
Mal2g0925 | 386 | Pfam | ELK domain | 278 | 299 | IPR005539 | GO:0003677 | |
Mal2g0925 | 386 | Pfam | KNOX2 domain | 170 | 218 | IPR005541 | GO:0003677|GO:0005634 | |
Mal2g0925 | 386 | ProSiteProfiles | ELK domain profile. | 278 | 298 | IPR005539 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal2g0925 | Mal-Chr2 | 10682119 | 10685833 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal2g0925 | 1 | 374 | Homeobox Transcription Factor Family | AT5G25220 | 63.158 | 1.65e-180 | 506 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-KNOX | Mal2g0925 | KNOX2 | 6.5e-19 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal2g0925 | - | - | gmx:100810257 | 569.696 |