LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g0877	ATGCCTCAGCTGCTACACGGGACACTTAAGGTAACCATAAGTGAAGTTGATAGGTTGCAAACTGGATGTAATTTGACTTTCTGTCGAAAGGGCACAACACGCAAAGGGAAGAGATTGCTTGCCCAAGTCAAAGGTTGTATCTTGTGCCGGCCTGAGATTGTTGGGACAAGACTCTATGCAACAGTTGATTTAGATAAGGCAAGGGTTGGAAGAACCAGAATGATAGGGAATCAACCCTCAAACCCTAAGTGGAACGAAACTTTTGAAATCTATTGTGCTCATTACATATCAAACTTTGTTTTCACTGTCAAAGATGATAATCCAATTGGTGCAACTCTAATAGGAAGAGCTTACATCCCTGCTGAGAAAATTCTCAAAGGACCTATAATTAACAGATGGGTTGAGATATTAGACGAAGAAGATCATCGTCCTGTACCAGGTGGTTCTAAAATTCGTGTTAGCATGCAATTCTCTAGTGTCATTGAGGATAGAAAATGTCTATGGTCTCAAGGTATACACATGCCATTTTTGGGAGTTCCGCGGACATTTTTTGACCAGAGACAAGGCTGTAGTGTTACCTTATACCAAGACGCTCATGTCCCTGATAGTGTTCATCCATGGATTCCAATATCAGGAACAAAGTACTATGTACCTGGAAGATGTTGGGAAGATATTTACAATGCCATTATGGATGCTAAACTCTTTATTTACATAACTGGTTGGTCTGTTCACACTGAAATAACTTTGATTAGGGACCCAAACAAGTCAACAGAAACTAGTATCACCCTAGGAGAAATGCTCAAGAAAAAAGCCAATGAAGGTGTTAATGTTCTTATGCTTGTTTGGGATGACAGAACCTCTGTTCCGGCTTTTAAGAAAGACGGTTTGATGGGAACACATGATCAAGAAACTGCAGAGTATTTTCAAAACACAAAGGTACATTGTGTTTTATGTCCGCGTAACCCTGATGGTGGAAGAAGCATAGTTCAAGGTTTTGAAACTTCAACTATGTTCACTCATCACCAAAAGACTATAGTTGTTGACGGCCATCATGTTGAAGGATCGCAGAAGCGAACAGTTATCAGTTTCATAGGCGGCATTGATCTGTGTGATGGAAGATATGATACAATGGAACATCCTTTGTTTTCAACATTGAATGCAATCCATCATGATGATTTTCATCAACCAAATTTCCCAGGTGCTTCTATTAAGAAAGGCGGTCCTAGAGAACCGTGGCATGATATTCACTGCAAACTAGAAGGACCTATTGCATGGGATGTGTTATACAATTTTGAGCAGAGGTGGGAAAAGCAAGTTGGGAAGCAATTCCTGTTCCCAATTGAAGTGCTTGATAGAATTCTTATCCACCCTTCTGATGCAATGATATCAGAAGAAGATGGTGACACTTGGAGTGTTCAGTTGTTTAGATCCATTGATGGTGGTGCTGTTTCTAACTTCCCTCAAGCACCAGATGAAGTTATTGAATTAGGCCTTGTTAGTGGAAAAGATAACATCATTGATAGAAGCATACAAGACGCCTATATAAACGCTATTCGAAGAGCGAAAAACTTCATCTATATTGAAAATCAGTATTTCCTAGGGAGTTCCTATGGTTGGCATTCAACTGATATTAAAGTTGAGGATATTGGTGCATTGCATCTCATACCAAAGGAGTTGTCATTGAAGATCATTAGCAAAATTGAAGCTGGAGAGAGATTTGTTGTGTATGTGGTGATTCCAATGTGGCCAGAAGGTATACCTGAAAGTGCTTCAGTTCAAGCAATATTAGATTGGCAAAGAAGGACCATGGAGATGATGTATTCTGACATTGCTGATGCCATTAAAAAGAAGAACATTGAAGCACACCCTCGTGATTATTTGACATTTTATTGCCTTGGCAAAAGGGAGAGTAAGAAAGATGGAGAATATACTCCTCCAGAGGAACCTGTGCCAGACAGTGATTATCATAGAGCACAAAAGTCTAGAAGATTCATGATCTATGTTCATTCCAAGATGATGATAGTGGATGATGAATACATAATAATTGGTTCAGCAAACATAAACCAAAGATCAATGGATGGTGGAAGAGACACAGAGATTGCAATGGGTGCATTCCAACCACATCATCTAGCATCCACATCCACATCCAATGGCTCACAAAGAGCACAAGGTCAGATATATGGGTTCAGGAGAGCATTATGGTATGAACATATTGGAGATAACAGTGATGATTTTGATGAGCCTGAAAGAGTAGAATGTGTAAAACTTGTGAACCGTGTTGCTGAGAGGAATTGGAAATTATACTGTGATGATGCATTAGATGAAAGTGTAAATACTCATCTTTTGCGATATCCTGTTGAAGTGGGTGAAGATGGAAGTGTAACAACATTTCCAGGGATGCAATATTTTCCTGATACAATGGCTTTGATTCTTGGTTCAAAATCTGAGTACCTTCCTCCCATACTTACCACCTAG	2475	0.3956	MPQLLHGTLKVTISEVDRLQTGCNLTFCRKGTTRKGKRLLAQVKGCILCRPEIVGTRLYATVDLDKARVGRTRMIGNQPSNPKWNETFEIYCAHYISNFVFTVKDDNPIGATLIGRAYIPAEKILKGPIINRWVEILDEEDHRPVPGGSKIRVSMQFSSVIEDRKCLWSQGIHMPFLGVPRTFFDQRQGCSVTLYQDAHVPDSVHPWIPISGTKYYVPGRCWEDIYNAIMDAKLFIYITGWSVHTEITLIRDPNKSTETSITLGEMLKKKANEGVNVLMLVWDDRTSVPAFKKDGLMGTHDQETAEYFQNTKVHCVLCPRNPDGGRSIVQGFETSTMFTHHQKTIVVDGHHVEGSQKRTVISFIGGIDLCDGRYDTMEHPLFSTLNAIHHDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKQFLFPIEVLDRILIHPSDAMISEEDGDTWSVQLFRSIDGGAVSNFPQAPDEVIELGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWHSTDIKVEDIGALHLIPKELSLKIISKIEAGERFVVYVVIPMWPEGIPESASVQAILDWQRRTMEMMYSDIADAIKKKNIEAHPRDYLTFYCLGKRESKKDGEYTPPEEPVPDSDYHRAQKSRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAFQPHHLASTSTSNGSQRAQGQIYGFRRALWYEHIGDNSDDFDEPERVECVKLVNRVAERNWKLYCDDALDESVNTHLLRYPVEVGEDGSVTTFPGMQYFPDTMALILGSKSEYLPPILTT*	825

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g0877	824	Pfam	Phospholipase D C terminal	743	814	IPR024632	-
	Mal2g0877	824	SUPERFAMILY	Phospholipase D/nuclease	510	749	-	-
	Mal2g0877	824	Pfam	C2 domain	37	135	IPR000008	-
	Mal2g0877	824	CDD	C2_plant_PLD	1	157	-	-
	Mal2g0877	824	PIRSF	PLD_plant	1	824	IPR011402	GO:0004630\|GO:0005509\|GO:0016020\|GO:0046470
	Mal2g0877	824	Gene3D	C2 domain	7	169	IPR035892	-
	Mal2g0877	824	ProSiteProfiles	C2 domain profile.	1	134	IPR000008	-
	Mal2g0877	824	SUPERFAMILY	C2 domain (Calcium/lipid-binding domain, CaLB)	3	158	IPR035892	-
	Mal2g0877	824	SMART	pld_4	336	373	IPR001736	GO:0003824
	Mal2g0877	824	SMART	pld_4	664	691	IPR001736	GO:0003824

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g0877	Mal-Chr2	10147325	10150931	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g0877	3	824	Phospholipase D Gene Family (Wang group)	AT3G15730	62.636	0.0	1062

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g0877	K01115		-	gmx:100794115	1245.72

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal2g0877	2	10147325	10150931	Mal2g0877	2	10147325	10150931	ECH

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