Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0877 ATGCCTCAGCTGCTACACGGGACACTTAAGGTAACCATAAGTGAAGTTGATAGGTTGCAAACTGGATGTAATTTGACTTTCTGTCGAAAGGGCACAACACGCAAAGGGAAGAGATTGCTTGCCCAAGTCAAAGGTTGTATCTTGTGCCGGCCTGAGATTGTTGGGACAAGACTCTATGCAACAGTTGATTTAGATAAGGCAAGGGTTGGAAGAACCAGAATGATAGGGAATCAACCCTCAAACCCTAAGTGGAACGAAACTTTTGAAATCTATTGTGCTCATTACATATCAAACTTTGTTTTCACTGTCAAAGATGATAATCCAATTGGTGCAACTCTAATAGGAAGAGCTTACATCCCTGCTGAGAAAATTCTCAAAGGACCTATAATTAACAGATGGGTTGAGATATTAGACGAAGAAGATCATCGTCCTGTACCAGGTGGTTCTAAAATTCGTGTTAGCATGCAATTCTCTAGTGTCATTGAGGATAGAAAATGTCTATGGTCTCAAGGTATACACATGCCATTTTTGGGAGTTCCGCGGACATTTTTTGACCAGAGACAAGGCTGTAGTGTTACCTTATACCAAGACGCTCATGTCCCTGATAGTGTTCATCCATGGATTCCAATATCAGGAACAAAGTACTATGTACCTGGAAGATGTTGGGAAGATATTTACAATGCCATTATGGATGCTAAACTCTTTATTTACATAACTGGTTGGTCTGTTCACACTGAAATAACTTTGATTAGGGACCCAAACAAGTCAACAGAAACTAGTATCACCCTAGGAGAAATGCTCAAGAAAAAAGCCAATGAAGGTGTTAATGTTCTTATGCTTGTTTGGGATGACAGAACCTCTGTTCCGGCTTTTAAGAAAGACGGTTTGATGGGAACACATGATCAAGAAACTGCAGAGTATTTTCAAAACACAAAGGTACATTGTGTTTTATGTCCGCGTAACCCTGATGGTGGAAGAAGCATAGTTCAAGGTTTTGAAACTTCAACTATGTTCACTCATCACCAAAAGACTATAGTTGTTGACGGCCATCATGTTGAAGGATCGCAGAAGCGAACAGTTATCAGTTTCATAGGCGGCATTGATCTGTGTGATGGAAGATATGATACAATGGAACATCCTTTGTTTTCAACATTGAATGCAATCCATCATGATGATTTTCATCAACCAAATTTCCCAGGTGCTTCTATTAAGAAAGGCGGTCCTAGAGAACCGTGGCATGATATTCACTGCAAACTAGAAGGACCTATTGCATGGGATGTGTTATACAATTTTGAGCAGAGGTGGGAAAAGCAAGTTGGGAAGCAATTCCTGTTCCCAATTGAAGTGCTTGATAGAATTCTTATCCACCCTTCTGATGCAATGATATCAGAAGAAGATGGTGACACTTGGAGTGTTCAGTTGTTTAGATCCATTGATGGTGGTGCTGTTTCTAACTTCCCTCAAGCACCAGATGAAGTTATTGAATTAGGCCTTGTTAGTGGAAAAGATAACATCATTGATAGAAGCATACAAGACGCCTATATAAACGCTATTCGAAGAGCGAAAAACTTCATCTATATTGAAAATCAGTATTTCCTAGGGAGTTCCTATGGTTGGCATTCAACTGATATTAAAGTTGAGGATATTGGTGCATTGCATCTCATACCAAAGGAGTTGTCATTGAAGATCATTAGCAAAATTGAAGCTGGAGAGAGATTTGTTGTGTATGTGGTGATTCCAATGTGGCCAGAAGGTATACCTGAAAGTGCTTCAGTTCAAGCAATATTAGATTGGCAAAGAAGGACCATGGAGATGATGTATTCTGACATTGCTGATGCCATTAAAAAGAAGAACATTGAAGCACACCCTCGTGATTATTTGACATTTTATTGCCTTGGCAAAAGGGAGAGTAAGAAAGATGGAGAATATACTCCTCCAGAGGAACCTGTGCCAGACAGTGATTATCATAGAGCACAAAAGTCTAGAAGATTCATGATCTATGTTCATTCCAAGATGATGATAGTGGATGATGAATACATAATAATTGGTTCAGCAAACATAAACCAAAGATCAATGGATGGTGGAAGAGACACAGAGATTGCAATGGGTGCATTCCAACCACATCATCTAGCATCCACATCCACATCCAATGGCTCACAAAGAGCACAAGGTCAGATATATGGGTTCAGGAGAGCATTATGGTATGAACATATTGGAGATAACAGTGATGATTTTGATGAGCCTGAAAGAGTAGAATGTGTAAAACTTGTGAACCGTGTTGCTGAGAGGAATTGGAAATTATACTGTGATGATGCATTAGATGAAAGTGTAAATACTCATCTTTTGCGATATCCTGTTGAAGTGGGTGAAGATGGAAGTGTAACAACATTTCCAGGGATGCAATATTTTCCTGATACAATGGCTTTGATTCTTGGTTCAAAATCTGAGTACCTTCCTCCCATACTTACCACCTAG 2475 0.3956 MPQLLHGTLKVTISEVDRLQTGCNLTFCRKGTTRKGKRLLAQVKGCILCRPEIVGTRLYATVDLDKARVGRTRMIGNQPSNPKWNETFEIYCAHYISNFVFTVKDDNPIGATLIGRAYIPAEKILKGPIINRWVEILDEEDHRPVPGGSKIRVSMQFSSVIEDRKCLWSQGIHMPFLGVPRTFFDQRQGCSVTLYQDAHVPDSVHPWIPISGTKYYVPGRCWEDIYNAIMDAKLFIYITGWSVHTEITLIRDPNKSTETSITLGEMLKKKANEGVNVLMLVWDDRTSVPAFKKDGLMGTHDQETAEYFQNTKVHCVLCPRNPDGGRSIVQGFETSTMFTHHQKTIVVDGHHVEGSQKRTVISFIGGIDLCDGRYDTMEHPLFSTLNAIHHDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKQFLFPIEVLDRILIHPSDAMISEEDGDTWSVQLFRSIDGGAVSNFPQAPDEVIELGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWHSTDIKVEDIGALHLIPKELSLKIISKIEAGERFVVYVVIPMWPEGIPESASVQAILDWQRRTMEMMYSDIADAIKKKNIEAHPRDYLTFYCLGKRESKKDGEYTPPEEPVPDSDYHRAQKSRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAFQPHHLASTSTSNGSQRAQGQIYGFRRALWYEHIGDNSDDFDEPERVECVKLVNRVAERNWKLYCDDALDESVNTHLLRYPVEVGEDGSVTTFPGMQYFPDTMALILGSKSEYLPPILTT* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0877 824 Pfam Phospholipase D C terminal 743 814 IPR024632 -
Mal2g0877 824 SUPERFAMILY Phospholipase D/nuclease 510 749 - -
Mal2g0877 824 Pfam C2 domain 37 135 IPR000008 -
Mal2g0877 824 CDD C2_plant_PLD 1 157 - -
Mal2g0877 824 PIRSF PLD_plant 1 824 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mal2g0877 824 Gene3D C2 domain 7 169 IPR035892 -
Mal2g0877 824 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Mal2g0877 824 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 158 IPR035892 -
Mal2g0877 824 SMART pld_4 336 373 IPR001736 GO:0003824
Mal2g0877 824 SMART pld_4 664 691 IPR001736 GO:0003824
Mal2g0877 824 SUPERFAMILY Phospholipase D/nuclease 179 444 - -
Mal2g0877 824 SMART C2_3c 8 133 IPR000008 -
Mal2g0877 824 Pfam Phospholipase D Active site motif 336 373 IPR001736 GO:0003824
Mal2g0877 824 Pfam Phospholipase D Active site motif 665 691 IPR001736 GO:0003824
Mal2g0877 824 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 336 373 IPR001736 GO:0003824
Mal2g0877 824 PANTHER PHOSPHOLIPASE D 3 824 IPR015679 -
Mal2g0877 824 Gene3D Endonuclease Chain A 210 447 - -
Mal2g0877 824 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 664 691 IPR001736 GO:0003824
Mal2g0877 824 PANTHER PHOSPHOLIPASE D ALPHA 3 3 824 - -
Mal2g0877 824 Gene3D Endonuclease Chain A 481 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0877 Mal-Chr2 10147325 10150931 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0877 3 824 Phospholipase D Gene Family (Wang group) AT3G15730 62.636 0.0 1062
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0877 K01115 - gmx:100794115 1245.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0877 2 10147325 10150931 Mal2g0877 2 10147325 10150931 ECH