Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0852 ATGATGTATGAAAGCCACCACGATGCCTTAGATCATGAGAGAAATATTAACATGATGGAAAACCATAATGGCGACGGAATCTTCCCGGATCAGGACGATAACAGCATATACAGCCTCACTGTTCCCCTTCCTCCTTTCGGCTTTCCGAGCGTCAAAAAAACCAAACTCCGTAACTTCGTTATCTCCCCCAATGATCGTCGCTACAGATGGTGGCAGATGTTTTTGGTGGTGTTAGTTTTCTACACTGCATGGGCATCACCATTTGAATTCGGGTTCTTGCGTGAACCTATGGAACCTCTTTCAACTACTGATAATGTTGTGAATGGTTTATTTTTGTTTGATATTGTGTTAACATTCTTTGTTGCGTACTACGATAAGTCTACATGTTTGCTTGTCGATAGACACGGGCTTATTGCAAAGAGGTATCTAAAATCATGGTTTCTATTTGATCTCATTTCCACTATTCCTTATGAAGTCGCCCACAAGGTGTTGCCTACTGTCAACACTTATGGCTACTTCGGTATGCTTCGCCTTTGGCGTCTCCGCAGAGTCAGTGCCATGTTTGCAAGATTAGAAAAGGATAGACATTATAACTACTTCTGGCTGCGATGTTCAAAGCTTATTTGTGTTACTCTATTTGTAGTACATTGTGGTGCCTGCATTTTCTACTATCTTGCCGACCATTATGCTAAAGACCTAAGCACAACGTGGCTTGGGCTTGTTTCTGATGCGGTTGACAAGAATACCATGTCTCTCTACGTAACATCAGTATACTGGTCCATAGTCACTGCTGCAACAGTTGGTTATGGTGATCTGCATCCTGTAAATACAAGGGAGATGATATTTGACATTTTCTATATACTCTTTAATGAGGGACTTACGGCATACATCATTGGAAACATGACAAATTTAGTTGTTCATGCCACAAGCAGAACTAGGAAATATAGGGACACAGTGCAAGCTGCATCAAATTTTTCCCACCGGAACAAGATACCTATCCGCTTGGAAGAACAGATGCTTTCTCATTTATTCATGAAGTACAGAACTGATTTGGAAGGAGTGCAGCAACAAGAGATTATTGATTCCCTTCCAAAAGCTATTCGATCTAGTATCTCATACTACTTATTCTATTCATTGATGGACGAAGTATACTTGTTTAAGGGAGTGTCAAAAGACCTGATTTTTCAATTGGTCACGGAGGTGAAGGCGGAGTATTTTCCTCCAAAGGAAGATGTGGTTTTGTATAACGAAGCACCAACAGACTTTTATATCTTTGTCACCGGTGGCGCAAACCTTATCAAACGAGTGAATGGAGTAGAACAGGTAGTTGGTAATATATCTGCAGGAGAGCTAGTTGGTGAAGTAGGAGTTCTATGTTACAGGCCACAGCCGTATACTGCCCGGACTAAACGATTGAGCCAAATTTTGCGCTTGAATCGTACTACATTTCTAAACCTTGTTCATTCAAGTGCTGGAGATGGGACAATAATCATGAACAACTTTCTCAATAATTTGCAAACTTCCAAAATTCCAGGGATGGATGCTATTTTGGTAGAAACAGAGGCGATGTTGGCTCGTGGTAAAATGGATCTGCCTATCAGCACATGCTTTGCAGCAAACAGAAATGACAAACAATTGTTACAGCGGTTGCTGAAGAAGGGCTCAGATCCAAATGAAGCAGACAGGAATGGAAGGACAGCACTGCATATCGCAGCTTCTAATGGTAATGAGTATTTTGTAACTCTCCTTCTACAGTTTGGTGCTGATCCAAATGTCAAAGATTTGGATGGAAATATCCCACTATGGGAAGCAATGATTGGTGGACATAGATCTGTCAAGAAAATTCTCATAGACAATGGGGCAGACATATTTTGTAATGATGCCGGGCGTCTAGCATGCTTTGCAGCTGAGAAAAATAACATTGAATTGCTTAAGGAACTCATAGAACTCGGTGTGGATGTGACAAAACCCGAAATGAGTGGAACCACTGCCCTGCATACAGCAGTAAGTGAAGGAAATGCGGAGATAGTAAAGTTCCTTTTGGACCAAGGAGCTGAAGTTGATAAGCAAGATGATTGTGGCTGGACTCCTAGGGCTTTGGCAGAACATCAAGGCCACGAAGAAATTAAAAATATATTCCAAAACATCAAAGAAGACAAACAAATAGAACCTGTTATTCCAATACCAGAAAATGGTAAGCCTAATGTGTCATGCATGGGAAGGTTTCAAAGTGCACCCGTTATGCCTACTGCTCTTGGATCCCAAGATAACATGCTACAACCACCTAATCAAGAAGAGTTGCCATGGCTAGATAGTCATCAGAGGCGAAAGGCCAACACCTTTCATAATTCAATTTTCGGGATGATATCTGCTGCCAATCAGAATAAAAAAGATAGTAATATATCTGAAAGCAGAATCACTAATACTGAGAACATGAATGGAATAATAGCTAGAGTGACACTTATTTGTCCAGAAAAAGGTGAACATGCTTTAAAGCTTGCTATTCTGCCCAAGTCCCTTGAAGAACTGCTAGATATTGGTGCCAAAAAGTTTGATTTCTCACCCACCAAAATTTTGACCAAAGAAGGAGCTGAAATTGACGATATAGATCTTATAAGAGATGGTGATCACCTTATTATTGCAAGTGACTGA 2652 0.4072 MMYESHHDALDHERNINMMENHNGDGIFPDQDDNSIYSLTVPLPPFGFPSVKKTKLRNFVISPNDRRYRWWQMFLVVLVFYTAWASPFEFGFLREPMEPLSTTDNVVNGLFLFDIVLTFFVAYYDKSTCLLVDRHGLIAKRYLKSWFLFDLISTIPYEVAHKVLPTVNTYGYFGMLRLWRLRRVSAMFARLEKDRHYNYFWLRCSKLICVTLFVVHCGACIFYYLADHYAKDLSTTWLGLVSDAVDKNTMSLYVTSVYWSIVTAATVGYGDLHPVNTREMIFDIFYILFNEGLTAYIIGNMTNLVVHATSRTRKYRDTVQAASNFSHRNKIPIRLEEQMLSHLFMKYRTDLEGVQQQEIIDSLPKAIRSSISYYLFYSLMDEVYLFKGVSKDLIFQLVTEVKAEYFPPKEDVVLYNEAPTDFYIFVTGGANLIKRVNGVEQVVGNISAGELVGEVGVLCYRPQPYTARTKRLSQILRLNRTTFLNLVHSSAGDGTIIMNNFLNNLQTSKIPGMDAILVETEAMLARGKMDLPISTCFAANRNDKQLLQRLLKKGSDPNEADRNGRTALHIAASNGNEYFVTLLLQFGADPNVKDLDGNIPLWEAMIGGHRSVKKILIDNGADIFCNDAGRLACFAAEKNNIELLKELIELGVDVTKPEMSGTTALHTAVSEGNAEIVKFLLDQGAEVDKQDDCGWTPRALAEHQGHEEIKNIFQNIKEDKQIEPVIPIPENGKPNVSCMGRFQSAPVMPTALGSQDNMLQPPNQEELPWLDSHQRRKANTFHNSIFGMISAANQNKKDSNISESRITNTENMNGIIARVTLICPEKGEHALKLAILPKSLEELLDIGAKKFDFSPTKILTKEGAEIDDIDLIRDGDHLIIASD* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0852 883 SUPERFAMILY cAMP-binding domain-like 310 503 IPR018490 -
Mal2g0852 883 Gene3D Jelly Rolls 351 510 IPR014710 -
Mal2g0852 883 SUPERFAMILY Ankyrin repeat 537 714 IPR036770 -
Mal2g0852 883 Pfam KHA, dimerisation domain of potassium ion channel 818 880 IPR021789 -
Mal2g0852 883 ProSiteProfiles Ankyrin repeat profile. 563 595 IPR002110 GO:0005515
Mal2g0852 883 PANTHER POTASSIUM CHANNEL AKT1 7 882 IPR045319 GO:0005249|GO:0006813
Mal2g0852 883 SUPERFAMILY Voltage-gated potassium channels 63 306 - -
Mal2g0852 883 ProSiteProfiles cAMP/cGMP binding motif profile. 385 504 IPR000595 -
Mal2g0852 883 ProSiteProfiles Ankyrin repeat profile. 660 692 IPR002110 GO:0005515
Mal2g0852 883 Pfam Cyclic nucleotide-binding domain 405 489 IPR000595 -
Mal2g0852 883 ProSiteProfiles Ankyrin repeat region circular profile. 563 594 - -
Mal2g0852 883 SMART cnmp_10 385 502 IPR000595 -
Mal2g0852 883 Gene3D - 532 715 IPR036770 -
Mal2g0852 883 ProSiteProfiles Ankyrin repeat region circular profile. 660 692 - -
Mal2g0852 883 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 7 882 - -
Mal2g0852 883 CDD CAP_ED 385 488 IPR000595 -
Mal2g0852 883 SMART ANK_2a 596 625 IPR002110 GO:0005515
Mal2g0852 883 SMART ANK_2a 660 689 IPR002110 GO:0005515
Mal2g0852 883 SMART ANK_2a 626 656 IPR002110 GO:0005515
Mal2g0852 883 SMART ANK_2a 530 559 IPR002110 GO:0005515
Mal2g0852 883 SMART ANK_2a 563 592 IPR002110 GO:0005515
Mal2g0852 883 ProSiteProfiles Ankyrin repeat region circular profile. 596 623 - -
Mal2g0852 883 ProSiteProfiles Ankyrin repeat profile. 596 628 IPR002110 GO:0005515
Mal2g0852 883 Pfam Ion transport protein 68 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal2g0852 883 PRINTS EAG/ELK/ERG potassium channel family signature 104 114 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal2g0852 883 PRINTS EAG/ELK/ERG potassium channel family signature 279 290 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal2g0852 883 PRINTS EAG/ELK/ERG potassium channel family signature 253 270 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal2g0852 883 PRINTS EAG/ELK/ERG potassium channel family signature 81 88 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal2g0852 883 PRINTS EAG/ELK/ERG potassium channel family signature 297 306 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal2g0852 883 Pfam Ankyrin repeats (3 copies) 537 626 IPR002110 GO:0005515
Mal2g0852 883 Pfam Ankyrin repeats (3 copies) 634 709 IPR002110 GO:0005515
Mal2g0852 883 ProSiteProfiles KHA domain profile. 818 883 IPR021789 -
Mal2g0852 883 PRINTS Ankyrin repeat signature 564 579 IPR002110 GO:0005515
Mal2g0852 883 PRINTS Ankyrin repeat signature 676 690 IPR002110 GO:0005515
Mal2g0852 883 Gene3D - 69 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0852 Mal-Chr2 9901892 9907626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0852 4 883 Ion Channels AT2G25600 55.293 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0852 K21867 - gmx:100786870 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0852 2 9901892 9907626 Mal2g0852 2 9901892 9907626 ECH
Mal1g5506 1 130058677 130063975 Mal2g0852 2 9901892 9907626 PCT