Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0848 ATGTTGGCCAAGGCTAGCTTCGATGGAGATGTTGCTTCAACTGAGATGTCAGGGTTAACAAGTCATCATCATCTACCAGTTTCAAGTCTTGAAAATGGCCAAGAAATGGCTGACATGCACCAAGATTCCAAGAAGAACAAGGTGAAGGATCAAAGCAACAAAACCATACCCTTTTACAAGCTTTTCTCATTTGCAGACTCTTGGGATTATTTGTTGATGTTTGTCGGGACTATCAGTGCTGTTGGGAATGGAGTCTCTATGCCTTTACTGACTATAATTATTGGAGATGCTATTGATTCTTTTGGAGGAAATGTTAGCACTAAACAAGTAGTTCATCTAGTTTCCAAGGTGTCTCTCAAGTTCGCAATCATGGGTGCAGGTGCCTTTTTTGCAGCATTTCTGCAGGTGGCTTGCTGGATGATCACCGGGGAGAGACAAGCTGCGAGAATAAGGGCCTTATACCTCAAAGCAATTTTAAGGCAAGATATAAGCTTCTTTGACAGGGAAACAAACAGTGGTGAGATTGTTGGAAGAATGTCAGGTGACACAGTTCTTATTCAAGATGCCATGGGAGAGAAGGTAGGAAAATTCATACAGTATGTGTCATCTTTTTTAGGAGGTTTAGTTGTCGCATTCATCAAGGGCTGGCTTCTAAGCCTTGTCCTTCTATCTTCTCTTCCTCTTCTTGTCTTCTCTGGTTCCATAATGAGCTTTGCTTTCGCAAAGATGGCATCCCGCGGACAAGCAGCATATTCTGAAGCAGCAACTATAGTAGAGCGGATAATTGGTTCAATTCGAACAGTTGCATCATTTACTGGTGAGAAACAAGCCATAACTCAATACAATGAATCATTAACTAAATCTTACATAATTGGAGTGCAAGAGGGGTTGGCTATTGGTTTAGGCCTCGGCTTGGTTCGTTTATTTGTTTACTGTAGTTATGCTTTGGCTGTATGGTTTGGAGGGAAGATGATACTAGAGAAAGGTTATACAGGAGGGGAAGTCATAAGCGTATTTTTTGCATTACTGACAGGTTCCTTGTCTCTAGGACAGGCATCTCCAAGCTTAACTGCATTTGCTGCTGGACAAGCTGCCGCTATTAAAATGTTTGAGACCATAAAGAGGCAGCCGAGTATTGATGCTTATGACACTGCTGGTAGGCAGCTAGATGATATTTCCGGAGATATAGAGCTTAGGGACGTTTGCTTTAGTTATCCTTCAAGACCGAATGAAATGATATTCAATGCATTTTCTCTTTCAATATCAAGCAGCACTACCGCGGCTTTGGTAGGGCAAAGTGGGAGTGGGAAATCCACGGTTATTAGTTTGATAGAGAGATTTTATGATCCACAGGGTGGTGAAATTCTCATTGACAATATCAACCTCAGAGAATTTCAACTGAAATGGATCAGACAAAAAATAGGCTTAGTCAGTCAGGAACCGGTTCTCTTTTCTTGTAGCATTAAAGAGAACATTGCCTATGGTAAGGGTGGAGCAACAGATGAAGAGATAAGAGCTGCAACAGAACTTGCTGAAGTTGCTATCTTCATTGATAAATTTCCCCATGGACTTGACACGATGGTTGGGGAGCATGGAGCTCAACTTTCTGGAGGCCAAAAGCAAAGAATAGCTATAGCAAGAGCAATTCTGAAAGATCCAAGAATTTTACTCCTAGATGAAGCAACAAGCGCCCTTGACGCAGAGTCTGAAAGAGTGGTACAAGCAACACTAGACAGAATTATGATAAACCGAACAACGATCATTGTAGCCCACCGCCTAACCACAATAAGGAATGCTGATATCATTGCCGTTATTAACCAAGGAAAAGTAGTAGAAAAAGGTACACATGTTGAGCTCACTAAAGATCCTGATGGTGCTTATAGTCAGCTAATTAGGCTGCAAGAAATTAAAAGGGATTCATCAGAACAATATGGTGCTAATGACTCAAATAAACTAGAAAACTTTGTAGAATCTGGAAGAGAGTCAAGACAACGATCTTTAAGTCCTGAGACTGTAAACAACGGTTACAAATCATTCATAGTATCAAATTATAGGCCTACCACACTAGAAGGAGGGTCTGAAGTTCTTCCTTCAGCAGCAGCATCACATAAAAGCAAGACTACAGATGTCCCATTTCTTCGCCTCGCTTATCTTAACAAGCCTGAAATCCCAGTGCTACTCATAGGGACTCTAGCAGCAGCAGTAACTGGAGCAATGCAACCCATTCTGGGACTTTTAGTCTCCAAGATGATAAATACATTCTTTGAGCCTGCAGATGAACTTCGTAAAGACTCAAAGTTTTGGGCAATGATGTTTGTGTTCTTTAGTGTGGCTTCATTTGTTTTTCAACCAATAAGGTCTTACTTTTTTGCTGTAGCTGGTTCTAAGTTGATAAAAAGGATCCGGTTAATGTGCTTTGAGAAAATAATTCACATGGAAGTAGGCTGGTTTGATAAAGCTGAGAATTCAAGTGGTTCACTTGGTGCAAGGCTGTCAACCGATGCTGCTTCGATTCGAACTTTGGTTGGGGATGCACTCGGCTTGCTTGTTCAAGATATTGCCACAGTAATTACAGCCTTGGTAATTGGCTTCGAGACTAGCTGGCAGCTTTCTCTCATCATTCTTGTTTTGCTACCTCTACTATTAGTAAATGGACATTTACAAATCAAGTCCATGCAAGGATTCAGCACAGATGCAAAGAAACTATATGAGGAAGCAAGTCAAGTAGCGAATAATGCAGTAGGGAATATCAGAACAATTTCCGCTTTCTGTGCTGAAGAGAAGGTGATGGACTTATACCAGAAGAAATGTGTAGTACCAGTCCAGACAGGAAAACGGCAGGGTATAGTTAGTGGAGTTGGTTATGGCTTATCAATCTTCTTTCTGTTCTGTGTTTATGCATGCAGTTTTTATGCTGGAGCCCAACTTATTGAGAATGGCCAAACATCAATATCAGATGTATTTCAAGTATTTTTCTCTCTCACAATGGCAGCCGTCGCAATAGCTCAATCTGGATTCATGGCTGTAGGAGCTAGTAAAGCAAAAAGTTCTGCTGCTTCTATATTTTCTATTCTTGATCAGAAATCAAAAATAGACCCCAGTAATGAATCAGGAATGACATTGGAAGATGTGAAGGGAGATATTGAGTTCCATCATGTCACTTTCAAGTATCCAACTAGACCTGATGTTCATATATTCAAAGATCTTTCTTTGACCATTCATTCAGGACAGACAGTTGCTCTAGTAGGTGAAAGTGGAAGTGGAAAGTCAACAGTGATATCATTGTTGCAAAGATTTTATGATCCAGATTCAGGTCAGATTAAACTGGATGGAACAGAAATCCAAAAGCTACAACTTAAATGGTATAGGCAGCAAATGGGCCTAGTAAGCCAGGAGCCTGTGTTGTTCAATGACACCGTCCGAGCCAACATTGCTTATGGAAAAGGTGGAAATGCAACTGAGGCTGAAATTATAGCAGCAGCAAAACTTGCAAATGCTCATAAGTTCATTAGCAGTTTGCAGCAGGGGTATGATACAATAGTAGGGGAGAGAGGGATTCAACTTTCTGGGGGACAGAAGCAGCGTGTGGCAATTGCAAGAGCCATAGTTAACAGTCCAAGAATATTACTACTAGATGAAGCCACAAGTGCACTTGATGCTGAGTCTGAAAAAGTGGTTCATGATGCACTTGATAGAGTGAGGGTAGACAGAACCACCATTGTGGTGGCTCATAGATTATCTACCATAACGGGTGCAAGCTCAATTATGGTAGTTAAAAACGGAGTGATTGAAGAGGAAGGAAAGCATGACACATTGCTCAACAAGGGTGGTACATATGCTTCTTTAGTAGCACTGCACAGTGCACACAACTATCACAGTTTCATTTAA 3888 0.4108 MLAKASFDGDVASTEMSGLTSHHHLPVSSLENGQEMADMHQDSKKNKVKDQSNKTIPFYKLFSFADSWDYLLMFVGTISAVGNGVSMPLLTIIIGDAIDSFGGNVSTKQVVHLVSKVSLKFAIMGAGAFFAAFLQVACWMITGERQAARIRALYLKAILRQDISFFDRETNSGEIVGRMSGDTVLIQDAMGEKVGKFIQYVSSFLGGLVVAFIKGWLLSLVLLSSLPLLVFSGSIMSFAFAKMASRGQAAYSEAATIVERIIGSIRTVASFTGEKQAITQYNESLTKSYIIGVQEGLAIGLGLGLVRLFVYCSYALAVWFGGKMILEKGYTGGEVISVFFALLTGSLSLGQASPSLTAFAAGQAAAIKMFETIKRQPSIDAYDTAGRQLDDISGDIELRDVCFSYPSRPNEMIFNAFSLSISSSTTAALVGQSGSGKSTVISLIERFYDPQGGEILIDNINLREFQLKWIRQKIGLVSQEPVLFSCSIKENIAYGKGGATDEEIRAATELAEVAIFIDKFPHGLDTMVGEHGAQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQATLDRIMINRTTIIVAHRLTTIRNADIIAVINQGKVVEKGTHVELTKDPDGAYSQLIRLQEIKRDSSEQYGANDSNKLENFVESGRESRQRSLSPETVNNGYKSFIVSNYRPTTLEGGSEVLPSAAASHKSKTTDVPFLRLAYLNKPEIPVLLIGTLAAAVTGAMQPILGLLVSKMINTFFEPADELRKDSKFWAMMFVFFSVASFVFQPIRSYFFAVAGSKLIKRIRLMCFEKIIHMEVGWFDKAENSSGSLGARLSTDAASIRTLVGDALGLLVQDIATVITALVIGFETSWQLSLIILVLLPLLLVNGHLQIKSMQGFSTDAKKLYEEASQVANNAVGNIRTISAFCAEEKVMDLYQKKCVVPVQTGKRQGIVSGVGYGLSIFFLFCVYACSFYAGAQLIENGQTSISDVFQVFFSLTMAAVAIAQSGFMAVGASKAKSSAASIFSILDQKSKIDPSNESGMTLEDVKGDIEFHHVTFKYPTRPDVHIFKDLSLTIHSGQTVALVGESGSGKSTVISLLQRFYDPDSGQIKLDGTEIQKLQLKWYRQQMGLVSQEPVLFNDTVRANIAYGKGGNATEAEIIAAAKLANAHKFISSLQQGYDTIVGERGIQLSGGQKQRVAIARAIVNSPRILLLDEATSALDAESEKVVHDALDRVRVDRTTIVVAHRLSTITGASSIMVVKNGVIEEEGKHDTLLNKGGTYASLVALHSAHNYHSFI* 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0848 1295 ProSitePatterns ABC transporters family signature. 535 549 IPR017871 GO:0005524
Mal2g0848 1295 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 396 632 IPR003439 GO:0005524
Mal2g0848 1295 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 49 1289 IPR039421 -
Mal2g0848 1295 CDD ABC_6TM_Pgp_ABCB1_D1_like 73 357 - -
Mal2g0848 1295 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 727 1013 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g0848 1295 SUPERFAMILY ABC transporter transmembrane region 714 1028 IPR036640 GO:0005524|GO:0016021
Mal2g0848 1295 Gene3D - 386 635 IPR027417 -
Mal2g0848 1295 Gene3D - 1038 1287 IPR027417 -
Mal2g0848 1295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1037 1284 IPR027417 -
Mal2g0848 1295 Pfam ABC transporter 1067 1216 IPR003439 GO:0005524
Mal2g0848 1295 Gene3D ABC transporter type 1, transmembrane domain 60 644 IPR036640 GO:0005524|GO:0016021
Mal2g0848 1295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 634 IPR027417 -
Mal2g0848 1295 SMART AAA_5 1075 1262 IPR003593 -
Mal2g0848 1295 SMART AAA_5 423 595 IPR003593 -
Mal2g0848 1295 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1048 1285 IPR003439 GO:0005524
Mal2g0848 1295 Gene3D ABC transporter type 1, transmembrane domain 706 1011 IPR036640 GO:0005524|GO:0016021
Mal2g0848 1295 Pfam ABC transporter transmembrane region 726 998 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g0848 1295 Pfam ABC transporter transmembrane region 73 347 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g0848 1295 CDD ABC_6TM_Pgp_ABCB1_D2_like 716 1031 - -
Mal2g0848 1295 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 74 361 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g0848 1295 ProSitePatterns ABC transporters family signature. 1188 1202 IPR017871 GO:0005524
Mal2g0848 1295 PANTHER TRANSPORTER ABC DOMAIN PROTEIN 49 1289 - -
Mal2g0848 1295 CDD ABC_MTABC3_MDL1_MDL2 1048 1283 - -
Mal2g0848 1295 Pfam ABC transporter 415 563 IPR003439 GO:0005524
Mal2g0848 1295 Gene3D ABC transporter type 1, transmembrane domain 1012 1290 IPR036640 GO:0005524|GO:0016021
Mal2g0848 1295 CDD ABC_MTABC3_MDL1_MDL2 396 634 - -
Mal2g0848 1295 SUPERFAMILY ABC transporter transmembrane region 60 380 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0848 Mal-Chr2 9833069 9838642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0848 43 635 Calmodulin-binding Proteins AT2G36910 37.667 1.31e-107 368