Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0839 ATGTCTCAAACTAACTGGGAAGCTGATAAGATGTTAGATGTTTACATCCATGATTACCTAGTTAAGAGGGATTTGAAGGCTTCTGCTCAGGCTTTTCAAGCTGAGGGAAAAGTATCCTCTGACCCTGTTGCTATTGATGCCCCTGGAGGCTTTCTGTTTGAGTGGTGGTCGGTTTTCTGGGACATTTTTATTGCAAGGACCGATGAGAAGCACTCCGAGGTGGCTGCATCGTATATAGAGACTCAATTAATTAAAGCAAGGGAACAACAGCAACACCAGCAGCAGCAGCCTCAACCTCAGCATGCACAGCAGCAGCAACAACACATGCAGATGCAACAACTTTTGTTGCAGAGGCAGGCACAGCAGCAGCTGCAGCAACAACAGCAGCAACAGCAACAGCAACAGCCACAATCGCAGCAGCAACAGTCACAACCTCAACAACAGCAAAATAGGGATAGGGCTCATCTCTTAAATGGTAATGCAAATGGGTTAGTTGGAAACCCAGGAACTGCAAATGCAATAGCAACAAAGATGTATGAGGAAAGGTTAAAAGTTCCTCCACAGAGGGATTCTTTAGATGATGCAGCTATGAAGCAAAGATTTGGTGAGAACATGGGTCAACTCTTGGACCCAAATCATGCCTCAATATTGAAGTCAGCTGCAGCTAGTGGTCAGCCTTCAGGGCAAGTTTTGCACGGCACTGCTGGTGGGATGTCTCCACAAGTTCAAGCTCGTAGTCAGCAATTACCAGGGTCTACACCGGATATAAAGAGTGAGATAAATCCTGTTTTAAATCCCAGAGCTGCGGGTCCTGAAGGATCATTGTCAGGAATTTCCGGATCAAATCAAGGGAACAACAATTTGACATTGAAAGGGTGGCCACTCACAGGTTTGGAGCATCTTCGCTCTGGTTTACTTCACCAGCAAAAGCCTTATATGCAGGCTCCTCAGCCATTTCATCAACTACAAATGTTGACACCACAGCATCAGCAACAACTTATGCTTGCACAACAGAGTTTGGCATCACCATCTGCCAGTGAAGAAAGTAGAAGGCTGAGAATGCTTCTGAATAATAGAAATATTGGCCTGAGTAAGGATGGCCTTTCGAACCCTGGGGGTGATGTGTTATCGAATGTTGGATCACCTCTTATTGATCGTGGCCCTCCTTTTTTTCCTCGTGGAGATACAGATATGCTAATGAAGTTGAAACTGGCTCAGCTACAGCAGCAACAACAGTCGAGCATCAATACACAACAGCAGCAACTTCAACAGCATGCTCTTTCGAATCAGCAATCTCAGACTTCAAATCATAGCATGAACCAGCAAGATAAGGTAGGGGGAGGTGGTGGTAGTGTCACCATGGATGGTAGCATGTCAAACTCATATAGAGGAAATGATCAGGTTTCAAAAAACCAGATGGGGAGAAAGAGAAAGCAACCTGTCTCTTCTTCGGGTCCTGCCAATAGTTCAGGAACGGCAAATACGGCAGGCCCTTCACCAAGTTCAGCTCCCTCAACTCCCTCAACTCATACTCCTGGAGATGCTATTTCAATGCCTGCGTTGCCTCATAATAGTAGTTCTTCAAAGCCTCTAATGATGTTTGGTACTGATGGTACCGGAACTCTTACATCACCTTCAAACCAGTTGTGGGATGATAAGGATCTTGAATTGAAGGCTAATGTGGATCATTTTGTCGACGATGGATCTTTAGATGAAAATGTAGAGTCTTTTTTATCGCAAGATGATACGGATCCTAGAGATCCTGTTGGCCGTTGTATGGATGTAAGCAAAGGCTTCACATTTTCTGATGTAAATTCTGTACGGGCAAGCTCAAGCAAAATTGCATGTTGCCATTTCTCATCTGATGGAAAATTACTTGCAAGTGGTGGCCATGACAAAAAGGCTGTTATATGGTACGCGGATTCACTAAAACAAAAAGCTATTCTTGAAGAGCACTCATCTTTGATAACCGATGTCCGTTTCAGTGCAAGCATGCCGCGTCTAGCAACATCTTCATTCGACAAAACTGTCAGGGTTTGGGATGTTGACAATCCCGGGTACTCCCTTCGCACTTTTACGGGACATTCTACATCTGTTATGTCACTAGATTTTCACCCAAATAAAGATGATCTTATCTGCTCGTGTGATGGTGATGGTGAGATACGGTATTGGAGCATAAACAATGGCAGCTGTGTTAGAGTCTCTAAGGGTGGCACTACCCAGATGAGATTTCAACCTCGTCTAGGGCGGTACCTCGCTGCAGCAGCTGAAAACATTGTGTCTATACTTGATGTGGAAACACAGGCATGCCGATATTCATTAAAGGGTCACACAAAGACAATAGATTCTGTATGTTGGGATCCATCGGGAGAATTGCTGGCATCTGTAAGCGAGGACTCTGTCAGGATCTGGACTCTTGGAATAGGAAGTGAAGGGGAATGTGTTCATGAGCTTAGCTGTAATGGAAGTAAGTTTCACTCATGTGTTTTCCATCCAACATTTCCTTCACTGCTCGTCATTGGTTGTTATCAGTCATTGGAGCTGTGGAACATGGCTGAGAACAAGACAATGACTTTGTCTGCTCATGATGGTTTAATTACTGCCTTGGCGGTGTCAACTGTAAATGGTTTGGTTGCTTCTGCCAGTCACGACAAGTTCATTAAGCTCTGGAAGTAA 2676 0.4462 MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTDEKHSEVAASYIETQLIKAREQQQHQQQQPQPQHAQQQQQHMQMQQLLLQRQAQQQLQQQQQQQQQQQPQSQQQQSQPQQQQNRDRAHLLNGNANGLVGNPGTANAIATKMYEERLKVPPQRDSLDDAAMKQRFGENMGQLLDPNHASILKSAAASGQPSGQVLHGTAGGMSPQVQARSQQLPGSTPDIKSEINPVLNPRAAGPEGSLSGISGSNQGNNNLTLKGWPLTGLEHLRSGLLHQQKPYMQAPQPFHQLQMLTPQHQQQLMLAQQSLASPSASEESRRLRMLLNNRNIGLSKDGLSNPGGDVLSNVGSPLIDRGPPFFPRGDTDMLMKLKLAQLQQQQQSSINTQQQQLQQHALSNQQSQTSNHSMNQQDKVGGGGGSVTMDGSMSNSYRGNDQVSKNQMGRKRKQPVSSSGPANSSGTANTAGPSPSSAPSTPSTHTPGDAISMPALPHNSSSSKPLMMFGTDGTGTLTSPSNQLWDDKDLELKANVDHFVDDGSLDENVESFLSQDDTDPRDPVGRCMDVSKGFTFSDVNSVRASSSKIACCHFSSDGKLLASGGHDKKAVIWYADSLKQKAILEEHSSLITDVRFSASMPRLATSSFDKTVRVWDVDNPGYSLRTFTGHSTSVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCVRVSKGGTTQMRFQPRLGRYLAAAAENIVSILDVETQACRYSLKGHTKTIDSVCWDPSGELLASVSEDSVRIWTLGIGSEGECVHELSCNGSKFHSCVFHPTFPSLLVIGCYQSLELWNMAENKTMTLSAHDGLITALAVSTVNGLVASASHDKFIKLWK* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0839 891 MobiDBLite consensus disorder prediction 415 513 - -
Mal2g0839 891 Pfam WD domain, G-beta repeat 647 681 IPR001680 GO:0005515
Mal2g0839 891 Pfam WD domain, G-beta repeat 688 725 IPR001680 GO:0005515
Mal2g0839 891 Pfam WD domain, G-beta repeat 854 891 IPR001680 GO:0005515
Mal2g0839 891 Pfam WD domain, G-beta repeat 770 804 IPR001680 GO:0005515
Mal2g0839 891 Pfam WD domain, G-beta repeat 609 638 IPR001680 GO:0005515
Mal2g0839 891 MobiDBLite consensus disorder prediction 220 284 - -
Mal2g0839 891 ProSiteProfiles Trp-Asp (WD) repeats profile. 607 638 IPR001680 GO:0005515
Mal2g0839 891 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 891 IPR044716 GO:0003714
Mal2g0839 891 Coils Coil 111 131 - -
Mal2g0839 891 MobiDBLite consensus disorder prediction 415 533 - -
Mal2g0839 891 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 649 684 - -
Mal2g0839 891 Gene3D - 586 739 IPR015943 GO:0005515
Mal2g0839 891 CDD WD40 607 891 - -
Mal2g0839 891 SMART WD40_4 685 725 IPR001680 GO:0005515
Mal2g0839 891 SMART WD40_4 642 681 IPR001680 GO:0005515
Mal2g0839 891 SMART WD40_4 811 850 IPR001680 GO:0005515
Mal2g0839 891 SMART WD40_4 767 805 IPR001680 GO:0005515
Mal2g0839 891 SMART WD40_4 852 891 IPR001680 GO:0005515
Mal2g0839 891 SMART WD40_4 600 639 IPR001680 GO:0005515
Mal2g0839 891 MobiDBLite consensus disorder prediction 88 111 - -
Mal2g0839 891 PANTHER TRANSCRIPTIONAL COREPRESSOR LEUNIG-LIKE PROTEIN 1 891 - -
Mal2g0839 891 ProSiteProfiles Trp-Asp (WD) repeats profile. 774 806 IPR001680 GO:0005515
Mal2g0839 891 Pfam LisH 10 36 IPR006594 GO:0005515
Mal2g0839 891 ProSiteProfiles Trp-Asp (WD) repeats profile. 859 891 IPR001680 GO:0005515
Mal2g0839 891 ProSiteProfiles Trp-Asp (WD) repeats profile. 649 684 IPR001680 GO:0005515
Mal2g0839 891 SMART Lish 8 40 IPR006594 GO:0005515
Mal2g0839 891 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 859 891 - -
Mal2g0839 891 SUPERFAMILY WD40 repeat-like 605 891 IPR036322 GO:0005515
Mal2g0839 891 MobiDBLite consensus disorder prediction 220 259 - -
Mal2g0839 891 Gene3D - 740 891 IPR015943 GO:0005515
Mal2g0839 891 ProSiteProfiles LIS1 homology (LisH) motif profile. 8 40 IPR006594 GO:0005515
Mal2g0839 891 ProSiteProfiles Trp-Asp (WD) repeats profile. 692 734 IPR001680 GO:0005515
Mal2g0839 891 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 692 730 - -
Mal2g0839 891 ProSitePatterns Trp-Asp (WD) repeats signature. 668 682 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0839 Mal-Chr2 9708443 9715486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0839 686 890 Miscellaneous Gene Families AT5G08390 24.286 4.18e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Mal2g0839 WD40 0.003 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0839 - - gmx:100816263 1254.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5484 1 129761918 129772540 Mal2g0839 2 9708443 9715486 PCT