Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0832 ATGACGATCGGTCATCTTTTCAACAATATTACCCGTGGCGGCACTGATGAAGACTTTGTTGCCGAAAAGGATGATGAAGGGTCTCCTGTTGGTGATTCTGGGCTAAATGATTCTGATGCTAGCCAAAGTGGTGATGAGAAAGAGAAACCTGCCAAAAAGGAACCAAAGAAGGATCTGTCTTCTAAGGCATCTGCTTCTACTTCTAAGAGGAAATCAAAAGATGCAGATGAAGATGGGAAGAAGAAAAAATACCAGATGCAAAGGGATCCAAATGCACCCAGGAGGGCAAGGCCTGCATTCATGTTCTTTGCTCAAAGGGAAAGTGAGAATCTAAAGAAAAATAATCCTGGGATTTCATTTAGGGGTGTGTCAAGAGTACTTGGAGAGAAATGGAAAAAGATGTCAGCTGAGGAGAAGGAGCCATTTGAGGCAAAAGCCCGTGTTTATAAAAAACGTTATCTGGAAATTGGTGGCTACTAG 480 0.425 MTIGHLFNNITRGGTDEDFVAEKDDEGSPVGDSGLNDSDASQSGDEKEKPAKKEPKKDLSSKASASTSKRKSKDADEDGKKKKYQMQRDPNAPRRARPAFMFFAQRESENLKKNNPGISFRGVSRVLGEKWKKMSAEEKEPFEAKARVYKKRYLEIGGY* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0832 159 SUPERFAMILY HMG-box 80 155 IPR036910 -
Mal2g0832 159 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 93 153 IPR009071 -
Mal2g0832 159 PANTHER FACT COMPLEX SUBUNIT SSRP1-B 15 155 - -
Mal2g0832 159 PANTHER FACT COMPLEX SUBUNIT SSRP1 15 155 - -
Mal2g0832 159 Pfam HMG (high mobility group) box 93 155 IPR009071 -
Mal2g0832 159 Gene3D High mobility group box domain 74 156 IPR036910 -
Mal2g0832 159 MobiDBLite consensus disorder prediction 1 97 - -
Mal2g0832 159 SMART hmgende2 92 158 IPR009071 -
Mal2g0832 159 MobiDBLite consensus disorder prediction 16 30 - -
Mal2g0832 159 MobiDBLite consensus disorder prediction 41 90 - -
Mal2g0832 159 CDD HMGB-UBF_HMG-box 93 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0832 Mal-Chr2 9624384 9626160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0832 89 153 ARID Transcription Factor Family AT1G04880 36.923 3.58e-06 43.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mal2g0832 HMG_box 1.9e-16 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0832 K09272 - gmx:100805034 164.081