Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0826 ATGAGTAAAGTGAATAGTAGTACATTGTGTGCCAAAGATGAAGAGCGTCCACTCAGAATTACCAGATCAAGGGCAAGAGTTTTGGGAGGACCCTCTTCGGAAAATGAAGGAACAAGTTCCAAAAGGGTTGTTTCTTCTTCTGAGAATAAAACATGTGTGCTTGTTCCTCACCGTAAAAGAAGGGCACCGCTTACTGATGTAACTAACATCACTGCAAAACCACATGATAAACGTGTTAAACATTCCAAATTTCAGGCCAAAGGAGTTTACCAGAAGAAAAACACGCAGCTAACTTCAAACGTCTCCATTGAAGTTTCATCAGCACAAGAGGGTGTTAAAGAGAAGTTAGCTGAAGAATTGTCTACCATAAAGATGGTAGAGTCAAATCACACCATTGCTGCAGTAACTTTGGCTGAAGAACCAGCTGAACATTGTATGTCCAACAACATAAGTGAGAATGTTATGACAGACACCGCGCTTTCAATGCAAGAGTGTGTGAACTCTGACATAAATATGATCTGTGAGAAGCTAGGAGCCTCGGATTGCCTGACCATTGTGGACATTGATAAAAAGTTAAAGGACTCTCCAATTTGGAGTGCTTATGCCCCTGATATATACAACAAAGTTCGAGTCACAGAGCTTGAAAAAAGACCATCAACCAATTACATGGAGAAGTTGCAGCAAGATATTTCTCCAAGCATGCGTGGAATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGCTGGTTCCAGACACTCTTTACCTTACTGTGAACCTCATTGATCGGTTTCTCTCAACAAGTTTGATTCAGAAACATAGGCTCCAGTTGCTCGGTGTTACTTGCATGTTCATTGCGTCAAAATATGAAGAGATGTGTGCTCCTCGAGTGGAAGAATTTTGCTTCATCACAGATAATACATACACAAAAGAAGAGGTAGTGAAAATGGAGAAGGAAGTTCTAAACCTTTTGCGTTTCCAGTTATCTGTTCCCACAAGCAAAACATTTCTCAGGAGATTCATCCAAGCAGCACAATCTTCTTACAAGGTTCCTCTTGCTGAACTGGAATTCCTGGCAAATTACCTAGCAGAGCTCACTCTTGTTGAATACAGCTTCTTACAGTTTTTACCTTCTCGTGTGGCTGCTTCTGCTGTATTCCTTGCCAGATGGACCCTCAACCACTCAGAACATCCATGGACTACAACTCTGGAGCATTTTACAAACTACAAAGCTTCAGAGCTAAAAACAGTTGTTCTTGCACTGGAAGATCTGCAACTTAATACCAAAGGTTGTTCCCTCCATGCTATACGTGAGAAATATAAACAAGAGAAGTTCAAAGGTGTTTCAAAACTGTCTCCAAAACCGGTGCAGTCACTATTCCAGGTTCAAGTGTAA 1401 0.4104 MSKVNSSTLCAKDEERPLRITRSRARVLGGPSSENEGTSSKRVVSSSENKTCVLVPHRKRRAPLTDVTNITAKPHDKRVKHSKFQAKGVYQKKNTQLTSNVSIEVSSAQEGVKEKLAEELSTIKMVESNHTIAAVTLAEEPAEHCMSNNISENVMTDTALSMQECVNSDINMICEKLGASDCLTIVDIDKKLKDSPIWSAYAPDIYNKVRVTELEKRPSTNYMEKLQQDISPSMRGILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSTSLIQKHRLQLLGVTCMFIASKYEEMCAPRVEEFCFITDNTYTKEEVVKMEKEVLNLLRFQLSVPTSKTFLRRFIQAAQSSYKVPLAELEFLANYLAELTLVEYSFLQFLPSRVAASAVFLARWTLNHSEHPWTTTLEHFTNYKASELKTVVLALEDLQLNTKGCSLHAIREKYKQEKFKGVSKLSPKPVQSLFQVQV* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0826 466 Pfam Cyclin, C-terminal domain 333 455 IPR004367 -
Mal2g0826 466 ProSitePatterns Cyclins signature. 235 266 IPR006671 -
Mal2g0826 466 SMART cyclin_7 240 324 IPR013763 -
Mal2g0826 466 SMART cyclin_7 337 425 IPR013763 -
Mal2g0826 466 Gene3D - 204 452 - -
Mal2g0826 466 SUPERFAMILY Cyclin-like 332 455 IPR036915 -
Mal2g0826 466 PANTHER CYCLINS 41 462 IPR039361 -
Mal2g0826 466 PIRSF Cyclin_A_B_D_E 22 465 IPR039361 -
Mal2g0826 466 MobiDBLite consensus disorder prediction 32 49 - -
Mal2g0826 466 CDD CYCLIN 331 423 IPR013763 -
Mal2g0826 466 Pfam Cyclin, N-terminal domain 204 331 IPR006671 -
Mal2g0826 466 SMART Cyclin_C_2 333 456 IPR004367 -
Mal2g0826 466 PANTHER CYCLIN-A2-4 41 462 - -
Mal2g0826 466 MobiDBLite consensus disorder prediction 1 49 - -
Mal2g0826 466 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 409 466 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal2g0826 466 SUPERFAMILY Cyclin-like 196 330 IPR036915 -
Mal2g0826 466 CDD CYCLIN 234 323 IPR013763 -
Mal2g0826 466 Gene3D - 218 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0826 Mal-Chr2 9574329 9578892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0826 11 462 Core Cell Cycle Gene Families AT5G25380 52.505 1.40e-151 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0826 K06627 - gmx:547780 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5477 1 129634679 129639557 Mal2g0826 2 9574329 9578892 PCT