Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0824 ATGGCAAACCCTACTCACCATGTCATCATTGATATATCAACAACTTCTTCTGAAACAACAACCTCTCATCAACAAACACAAACACCTGTTGATGATGCTAGATTGCCTGTTTCAAATGACTCAAATTCATCACCATCACCACGACGAAGAGGACGTAGTAGTAGAAGAAGTCCATTGAATTCAGGGTTTTGGGTTTCATTGGAATTTATTTTCACATTATCTCAAATTATTGCTTCTGTTGTTGTTCTTAAATTATCAAAACATGAACGTCCACATGCTCCATTGTTTGCTTGGATCATTGGTTATGCTTCTGGATGTGTTGTTTCCCTTCCTTTGCTCCTTTGGAGATATTATTCTAGAGACCAAAATCCATCTCAAACCAATTCAAGGATTGATGATCCCTCTGGGACACTTCTTTCAAATTCAACTGCAATTCAAGGGGAAGATGATGCTCCTGCTGTTGCATCATCCACAACCAATCCAGCTTCTTTGTTGAATAATCCCAGACTGAAGCTACTTATGGAATACTTCAAAATCGCCTTAGATTTATTTTTTGCAATATGGTTTGTTATTGGAAATGTATGGATTTTTGGAGGACATTCATCTGCTAGCGAAGCTCCTAATTTATACCGGTTATGTGTAGTGTTTCTTACTTTTAGCTGTATCGGTTACGCAATGCCCTTCATTCTATGTTTAACAATCTGCTGCTGTCTTCCTTGTATAATATCCACTCTTGGGGTCACAGAGGATCTGGCACAAACCCGAGGTGCAACCTCTGAATCCATTAATGCTTTACCAACTCACAAATTCAAAATGATGAAAAGTGAAAGCAGAGATGAATCTGATAGCAGTCCAACTGTTCGTGAAGGTGGAATTGTGGCCGGAGGAACTGAAAATGAACGAATGATCTCTGGAGAAGATGCTGTTTGCTGCATATGCATAGCAAACTATGAAAATGACGACGAGTTGAGAGAATTACCCTGTTCACATCTTTTCCACAAAGAATGCGTCGACAAGTGGTTGAAGATAAATGCATTATGCCCCCTTTGCAAGAGTGAAGTTGGTGGGAACGTAACAGCGCCAGTCATTGAGGAAAATGCCAGCCAACAAAGGAGTGAGAGCAGGGCTGAGAATGGCCTTGTCAATACCTCATCATAA 1158 0.4016 MANPTHHVIIDISTTSSETTTSHQQTQTPVDDARLPVSNDSNSSPSPRRRGRSSRRSPLNSGFWVSLEFIFTLSQIIASVVVLKLSKHERPHAPLFAWIIGYASGCVVSLPLLLWRYYSRDQNPSQTNSRIDDPSGTLLSNSTAIQGEDDAPAVASSTTNPASLLNNPRLKLLMEYFKIALDLFFAIWFVIGNVWIFGGHSSASEAPNLYRLCVVFLTFSCIGYAMPFILCLTICCCLPCIISTLGVTEDLAQTRGATSESINALPTHKFKMMKSESRDESDSSPTVREGGIVAGGTENERMISGEDAVCCICIANYENDDELRELPCSHLFHKECVDKWLKINALCPLCKSEVGGNVTAPVIEENASQQRSESRAENGLVNTSS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0824 385 MobiDBLite consensus disorder prediction 10 57 - -
Mal2g0824 385 Pfam Ring finger domain 310 351 IPR001841 -
Mal2g0824 385 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 17 372 - -
Mal2g0824 385 SUPERFAMILY RING/U-box 302 355 - -
Mal2g0824 385 CDD RING-H2_RNF111_like 309 351 - -
Mal2g0824 385 ProSiteProfiles Zinc finger RING-type profile. 310 351 IPR001841 -
Mal2g0824 385 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 17 372 - -
Mal2g0824 385 MobiDBLite consensus disorder prediction 10 48 - -
Mal2g0824 385 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 294 357 IPR013083 -
Mal2g0824 385 SMART ring_2 310 350 IPR001841 -
Mal2g0824 385 MobiDBLite consensus disorder prediction 365 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0824 Mal-Chr2 9561620 9564057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0824 22 360 C3H Transcription Factor Family AT1G80400 50.140 5.39e-125 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0824 - - gmx:100775815 492.656