Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal2g0819 | ATGACCAATTTTCAGAAACCTACCATAAAGGAACCAAAGAAGGATCTGTCTTCCAACGCATCTGCTTCTACTTCTAAGAGGAAATCAAAAGATGCAGATGAAGATGGGAAGAAGAAAAAATACCAGATGCAAAGGGATCCAAATGCACCCAGGAGGGCATTGTCTGGATTCATGTTCTTTTCTCGAAGGGGAAGAGAGAGTCTAAAGAAAATTAATCCTGGGATTTCATTTACGGATGTGTCAAGAGTACTTGGAGAGAAATGGAAAAAGATGTCAGATGCTGAGCGGAAGAATCCACTTGTACCATCTAAAGGAGAGGAGATATCAAAGTACAAGGAGCTCGATCCATTCGATCGTTTACTACCGCTAAAAGCCCTCTGTGAAGTTAGAGCTGACCAACATGATGTGGTATCATATATTAATGACGCTTTAAAAGAAGGAACCCAGATTTCTTCTTTTCGCAAAGAGGCCTTTGGAAGAGATGGCACATCCTATTGGTACGATGCAAACACAAAAGCCCAGAGTCACAGATTGTACAGGGAAACAATCACATCAGTCTCAACTCCAAACCGTAAGGTCAAAGGATGTTTATCACTTCCCAACTTTCAATGGGAAACACTTGCCTCCAATCTTGACGAATTTTCTGAAGTAGCTGAAAAATTATCATCTAGCAAGTCTCCTGCTGAAGTTTTTATGGGCAACAGGCTTCAAAGTGATGCTATTCCTCTTCTTGAGAAACTTCAAAAGGCCGTTAATTCAGTCTCTGGCCCACCAGGATCTGGCTCCAGTTACTTGTATGGATTTTTTGACCAAGCTTGGAAAGATGGAATGACCAAGGACGAAGCTGAGGATCTTGTCAAAAAGGCAGTTTCACTTGCCATTGCTCGTGATGGTGCTAGTGGCAGAGTTGTCCGAACAGTCATAATAAACTCAGAAGGAGTGACCAGGAATTTATACCCAGGTGATCAACTTCCGATATGGCACGATGAACTGGAGGCTCATAACTCATTGGTAGACATTCTTGGTGCCCCAGAGCCAATGAACATATGA | 1050 | 0.4238 | MTNFQKPTIKEPKKDLSSNASASTSKRKSKDADEDGKKKKYQMQRDPNAPRRALSGFMFFSRRGRESLKKINPGISFTDVSRVLGEKWKKMSDAERKNPLVPSKGEEISKYKELDPFDRLLPLKALCEVRADQHDVVSYINDALKEGTQISSFRKEAFGRDGTSYWYDANTKAQSHRLYRETITSVSTPNRKVKGCLSLPNFQWETLASNLDEFSEVAEKLSSSKSPAEVFMGNRLQSDAIPLLEKLQKAVNSVSGPPGSGSSYLYGFFDQAWKDGMTKDEAEDLVKKAVSLAIARDGASGRVVRTVIINSEGVTRNLYPGDQLPIWHDELEAHNSLVDILGAPEPMNI* | 350 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal2g0819 | 349 | PANTHER | REMODELING AND SPACING FACTOR 1 | 81 | 249 | IPR028938 | GO:0006355|GO:0031213 | |
Mal2g0819 | 349 | Gene3D | High mobility group box domain | 33 | 129 | IPR036910 | - | |
Mal2g0819 | 349 | PANTHER | DDT DOMAIN-CONTAINING PROTEIN DDR4 | 81 | 249 | - | - | |
Mal2g0819 | 349 | CDD | HMGB-UBF_HMG-box | 50 | 97 | - | - | |
Mal2g0819 | 349 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 50 | 119 | IPR009071 | - | |
Mal2g0819 | 349 | Gene3D | Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 | 258 | 330 | IPR029055 | - | |
Mal2g0819 | 349 | SUPERFAMILY | N-terminal nucleophile aminohydrolases (Ntn hydrolases) | 259 | 332 | IPR029055 | - | |
Mal2g0819 | 349 | MobiDBLite | consensus disorder prediction | 26 | 46 | - | - | |
Mal2g0819 | 349 | SMART | hmgende2 | 49 | 120 | IPR009071 | - | |
Mal2g0819 | 349 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
Mal2g0819 | 349 | Pfam | Proteasome subunit | 259 | 309 | IPR001353 | GO:0005839|GO:0051603 | |
Mal2g0819 | 349 | SUPERFAMILY | HMG-box | 37 | 97 | IPR036910 | - | |
Mal2g0819 | 349 | Pfam | HMG (high mobility group) box | 50 | 97 | IPR009071 | - | |
Mal2g0819 | 349 | PRINTS | Proteasome component signature | 270 | 281 | IPR000243 | GO:0004298|GO:0005839|GO:0051603 | |
Mal2g0819 | 349 | PRINTS | Proteasome component signature | 259 | 270 | IPR000243 | GO:0004298|GO:0005839|GO:0051603 | |
Mal2g0819 | 349 | PRINTS | Proteasome component signature | 295 | 306 | IPR000243 | GO:0004298|GO:0005839|GO:0051603 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal2g0819 | Mal-Chr2 | 9520707 | 9528547 | Dispersed/Proximal |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | HMG | Mal2g0819 | Proteasome | 1.3e-07 | CL0052 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal2g0819 | - | - | lja:Lj1g3v1943860.2 | 234.572 |