Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0816 ATGGTCACGAGATTTCCTCTGCCAAATTATAGTGAGAAGGGAGGAGGTAACAGATTTGCTGGTGAAAATCAGAGTGGTAAATATCTACAGGATGAAGACTTTGTTGCCGAAAAGGATGATGAAGGGTCTCCTATTGATGCTAGCCAAAGTGGTGATGAGAAAGAGAAACCTGCCATAAAGGAACCAAAGAAGGATCTGTCTTCCAAGGCATCTGCTTCTACTTCTAAGAGGAAATCAAAAGATGCAGATGAAGATGGGAAGAAGAAAAAAATACCAGATGATAAGGGATCCAAATGCACCCAGGAGGGCAATGCCTGCATTCATAATCTAAAGAAAATTCATCCTGGGATTTCATTTACGGATGTGTCAAGAGTACTTGGAGAGAAATGGAAAAAGATGTCAGCTGAGGAGAAGGAGCCATACGAGGAAAAAGCCCGTGTTTATAAAAAACGTTATATGGAAATTGGTGGCTACTAG 477 0.4109 MVTRFPLPNYSEKGGGNRFAGENQSGKYLQDEDFVAEKDDEGSPIDASQSGDEKEKPAIKEPKKDLSSKASASTSKRKSKDADEDGKKKKIPDDKGSKCTQEGNACIHNLKKIHPGISFTDVSRVLGEKWKKMSAEEKEPYEEKARVYKKRYMEIGGY* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0816 158 Gene3D High mobility group box domain 103 155 IPR036910 -
Mal2g0816 158 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 62 158 IPR009071 -
Mal2g0816 158 SUPERFAMILY HMG-box 106 154 IPR036910 -
Mal2g0816 158 MobiDBLite consensus disorder prediction 1 101 - -
Mal2g0816 158 PANTHER FACT COMPLEX SUBUNIT SSRP1-B 21 154 - -
Mal2g0816 158 PANTHER FACT COMPLEX SUBUNIT SSRP1 21 154 - -
Mal2g0816 158 CDD HMGB-UBF_HMG-box 109 154 - -
Mal2g0816 158 Pfam HMG (high mobility group) box 109 154 IPR009071 -
Mal2g0816 158 MobiDBLite consensus disorder prediction 40 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0816 Mal-Chr2 9491105 9492200 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mal2g0816 HMG_box 4.3e-13 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0816 K09272 - gmx:100805034 129.028