Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0809 ATGCAGTTCAAATCATCACAATCATCATTTCGAGATCGCACGCATGAATTCCACACCGTTGCAGAGAGATTGAAGAAATCAATTTCATCAGGATCTGGTCCAAACGGAGCCACCACCAGCGCTCCTTCTTCCTCTTTTCCTTCATCTTCTTCTTCCAGATCGGACGATCCACGATCCGCCGTTGCAATTCAATCAGAGTTTAATCGAAGAGCTTCCAAAATCGGTTATGGAATTCACCAAACCTCTCAGAAACTTTCCAAGCTCGCCAAATTGGCCAAAAGGACTTCGGTTTTTGATGATCCAACAATGGAGATTCAAGAATTAACAAGTGTAATTAAGCAAGATATTACCGCACTTAACTCTGCGGTTGTGGATCTTCAATTAATCAGTAATTCTAGGAATGAGAGTGGAAATGTTTCTACCGACACTACTAGTCATTCAACTACGGTTGTCGATGACCTAAAGACTCGATTGATGAGTACCACAAAAGAGTTTAAAGATGTTCTTACTATGCGAACTGAGAACTTGAAAGTGCATGAGAATCGAAGGCAATTGTTTTCGGCGAATGCTTCTAAGGATTCTGCAAATCCTTTCATCCGTCAACGCCCGTTAGCTACAAAGGCAGCTGCTAGTACTTCTAGTGCCCCTGCACCTCCATGGGCTAGTGGGAAGCAGGTGGATGGAGAGAGTCAACCGTTGCTGCAACAACAACAGCAGCAGCAGCAGCAGGTAGTTCCATTGCAGGACAGTTACATGCAAAGCAGAGCTGAAGCTCTTCAAAATGTTGAGTCCACTATTCATGAGCTCAGCAACATCTTTAATCAACTAGCAACACTTGTCTCCCAGCAAGGGGAGGTTGCCATCAGGATTGATGAGAATATGGATGATACATTGGCAAATGTAGAGGGGGCACAAGGGGCTTTGTTGAAGTATTTGAATAGTATATCATCTAATAGGTGGCTGATGATCAAGATTTTCTTTGTATTGATGTTTTTCCTCATGGTTTTCTTATTTTTTGTGGCATAG 1026 0.4279 MQFKSSQSSFRDRTHEFHTVAERLKKSISSGSGPNGATTSAPSSSFPSSSSSRSDDPRSAVAIQSEFNRRASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSAVVDLQLISNSRNESGNVSTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFSANASKDSANPFIRQRPLATKAAASTSSAPAPPWASGKQVDGESQPLLQQQQQQQQQVVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLMFFLMVFLFFVA* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0809 341 MobiDBLite consensus disorder prediction 9 23 - -
Mal2g0809 341 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 8 26 IPR021538 -
Mal2g0809 341 Gene3D - 62 304 - -
Mal2g0809 341 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 249 311 IPR000727 -
Mal2g0809 341 PANTHER SYNTAXIN 2 340 IPR045242 -
Mal2g0809 341 MobiDBLite consensus disorder prediction 1 60 - -
Mal2g0809 341 CDD SNARE_syntaxin5 252 325 - -
Mal2g0809 341 ProSitePatterns Syntaxin / epimorphin family signature. 255 294 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mal2g0809 341 MobiDBLite consensus disorder prediction 25 60 - -
Mal2g0809 341 SMART tSNARE_6 244 311 IPR000727 -
Mal2g0809 341 Pfam SNARE domain 286 337 IPR000727 -
Mal2g0809 341 MobiDBLite consensus disorder prediction 205 239 - -
Mal2g0809 341 PANTHER SYNTAXIN-32-LIKE 2 340 - -
Mal2g0809 341 SUPERFAMILY t-snare proteins 65 304 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0809 Mal-Chr2 9390701 9394916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0809 1 341 SNARE and Associated Proteins AT3G24350 62.735 4.84e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0809 K08490 - gmx:100777961 475.322