Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0804 ATGGTAGGGGTGGCACTAATGCACTCCGAGCCTCTTCGTTTTGAGTGCAATGACATGAAGGTTATCAAGGAGAAAGATGTGTATAATCTGCCATCAAATGAGGAGCACGTGCATGGAGAAACATGTAGCCAATCATCAGAGCACAAAAAGATCAATGACTTACGAGAAAGAGGATATATGGAATATGGATGTCAACATTACCGGAGAAGGTGTCGTATTAGGGCCCCTTGTTGCAATGAGATATTTGATTGCCGCCATTGTCACAATGAAGCAAAAAATAACATCAACATTGATCAGAAGCACAGACACGATATTCCCCGCCATCAAGTCGAACAGGTGATGTGTTCACTATGTGGAACTGAACAAGAGGTTCAGCAGAACTGTATCAATTGCGGTGTGTGCATGGGCAAGTACTTCTGTGAGACGTGTAAGCTCTTTGATGATGATGTATCTAAGCAGCAGTATCATTGCAGTGGTTGCGGAATTTGGTGTGAGAATTTCTTCCACTGCTATAAGTGTGGATGTTGCTACTCAACTCTGCTGAAAAACGCTCACCCCTGCGTGGAAGGAGCAATGCATCGGGATTGCTCTGTTTGTTTTGAGTATTTGTTTGAATCTGTTAACGATGTCAGTGTGTTGCATTCCGGACATACAATCCATAAAAGCTGTCTGAATGAGATGAGGGAACATTTTCAGTATGCATGCTCTTTGTGCTCAAAGTCAGTTTGTGATATGTCAAAGGTTTGGGAAAAAATTGATATAGAACTTGCTGCTACACCGATGCCTGAACCATATCTTAATAAAATGGTTTGGATCCTTTGCAATGATTGTGGTGAAAATTCTCATGTCCAGTTCCATCTTGTTGCACAAAAGTGCTTGAACTGCAAATCTTATAACACAAGACAAACAAGAGGCTGA 918 0.4172 MVGVALMHSEPLRFECNDMKVIKEKDVYNLPSNEEHVHGETCSQSSEHKKINDLRERGYMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINIDQKHRHDIPRHQVEQVMCSLCGTEQEVQQNCINCGVCMGKYFCETCKLFDDDVSKQQYHCSGCGIWCENFFHCYKCGCCYSTLLKNAHPCVEGAMHRDCSVCFEYLFESVNDVSVLHSGHTIHKSCLNEMREHFQYACSLCSKSVCDMSKVWEKIDIELAATPMPEPYLNKMVWILCNDCGENSHVQFHLVAQKCLNCKSYNTRQTRG* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0804 305 PANTHER CHY-TYPE/CTCHY-TYPE/RING-TYPE ZINC FINGER PROTEIN 27 305 - -
Mal2g0804 305 ProSiteProfiles Zinc finger RING-type profile. 196 239 IPR001841 -
Mal2g0804 305 ProSiteProfiles Zinc finger CTCHY-type profile. 135 195 IPR017921 -
Mal2g0804 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 241 IPR013083 -
Mal2g0804 305 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 27 305 - -
Mal2g0804 305 Gene3D - 267 305 - -
Mal2g0804 305 SUPERFAMILY Zinc hairpin stack 136 189 IPR037275 -
Mal2g0804 305 SMART ring_2 196 238 IPR001841 -
Mal2g0804 305 SUPERFAMILY CHY zinc finger-like 61 135 IPR037274 GO:0008270
Mal2g0804 305 Pfam Zinc-ribbon 243 301 IPR039512 -
Mal2g0804 305 ProSiteProfiles Zinc finger CHY-type profile. 57 133 IPR008913 GO:0008270
Mal2g0804 305 Pfam CHY zinc finger 64 145 IPR008913 GO:0008270
Mal2g0804 305 SUPERFAMILY RING/U-box 195 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0804 Mal-Chr2 9313071 9327580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0804 62 301 C2H2 Transcription Factor Family AT3G18290 37.945 4.47e-45 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5448 1 128947475 128955320 Mal2g0804 2 9313071 9327580 PCT