Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0770 ATGGATGAATATTCTGGCAAAAGAGCCAATGATGGGGTGGTGGTCCCTAGAAAGGGGATGGGCACCATGTTCAAAGATACTGCCAATAATCGAGATCGAAATGGTCAAGTATGTAGCCGCCTTGGTTGCAGCAGCAAAGTCAACTCTTCTAAAAGTGCTCAAATTGGTTCTTCTGAAAAGGGTAAATCATCGAGGCCTTCATTTCGGTTCGCTTCAAATAGCAAAGAAACAACTGGTAGCTCCTCTAGAACTTCCTCCGGGAGTAGTAACCCAGGACAACCCCATAGAAAGCCTCAGAAAACATTATCATCTCAGATAGAGACGGATTCATCTGAAACTAGTAGTGTACAAGATGAACCAGAAGTTTCAAAGCTCGCACCTCCACAAAAAAATCAGAGAGGTCTTCAAGCTGCAGGGGAAAACACAGATTCTGGTAATGGCATGGTGATGGAAGTAGGGAGTTCTAGTTTAACATCTAATACAAGATCTAGGAGAAATTTTCATCCAAAACCTGGATTACGTAGTCAAGAAATTCAAAGCACCGGCGGTCCAGGGACACGGGCTGGTACGAGTAGGTATGGGTTAAGGAACCTCAAATGCAACTCCATTTCTGATGTCATCCCTGCGGGTTGTACACCATCAGATTCAAACCTTAACAAAAGGAAGGATGCGATAAAAAAGAGAAATTGTGAAGGGGAAAGTAGTTCTACAGCTAGAGGGAAAAAAATTAACGGGCCCTCGGTAGAAGGGCGAAATTCTGTTTCGAGAAATGGCATATCTATCTCTGATTCAAGAATATCTAGAAATATCCCTCACAGGGACAGACCAGACAGCAACATAGCGTCTGTTAGAACACGAAGATCAATTGGTGGTCATGCTAGGGGAAGACTTTCTGGCCAAGGAAATGCTAATTCTGTGGCACCAAATCAGTCCCTTATCATGGTACCTTCTTTTTCTCATTCTGGCAATCTTAATGCTCCTGGTGTACAACATCACAGTTCTCTGGAGACTCCTTCAAGTCCAAGCTCTTACAGTGGAGTAGGTACTAGCAGTGAAGAGTTATATGGTGTTATGCCAGGGTCTCCTGCAGAATATGGCCTCACTCATTCTCTAATAAATCGGGATAGCTTTCGACGGCGCTACAACATGGATGGTATTGCTGAGGTACTATTGGCACTTGAGAGGATTGAACAAGATGTCGAGCTAACACACGAGCAGCAAATTCTTATGCTGGAGTCCAACTTGTTCCTTACTGGATTAAACTTCTACGATCAGCATAGAGAAATGCGATTGGACATCGATAATATGTCGTATGAGGAACTACTGGCTCTGGAAGAGAGGATGGGTACTGTGAGCACAGCTGTAACAGAGGAAGCTATATCAGAATGCCTAAAGAGAAGTTTTTATCAATCCTCACACTCAGACAATGCATCTAAGAGTTGCAAAGAGAATAAGGATGATATCAAATGCAGCATCTGCCAGGAGGAATATGTCACGGCGGATGAAGTGGGGAGTTTAGGATGCGAACACAAGTATCATGTGGTTTGCATACAGCAGTGGTTACGGCTAAAGAACTGGTGCCCTATTTGCAAAGCATCAGTGGCATCATCAAGTTCATCGTCGTCCCACTCCCACTAG 1638 0.4396 MDEYSGKRANDGVVVPRKGMGTMFKDTANNRDRNGQVCSRLGCSSKVNSSKSAQIGSSEKGKSSRPSFRFASNSKETTGSSSRTSSGSSNPGQPHRKPQKTLSSQIETDSSETSSVQDEPEVSKLAPPQKNQRGLQAAGENTDSGNGMVMEVGSSSLTSNTRSRRNFHPKPGLRSQEIQSTGGPGTRAGTSRYGLRNLKCNSISDVIPAGCTPSDSNLNKRKDAIKKRNCEGESSSTARGKKINGPSVEGRNSVSRNGISISDSRISRNIPHRDRPDSNIASVRTRRSIGGHARGRLSGQGNANSVAPNQSLIMVPSFSHSGNLNAPGVQHHSSLETPSSPSSYSGVGTSSEELYGVMPGSPAEYGLTHSLINRDSFRRRYNMDGIAEVLLALERIEQDVELTHEQQILMLESNLFLTGLNFYDQHREMRLDIDNMSYEELLALEERMGTVSTAVTEEAISECLKRSFYQSSHSDNASKSCKENKDDIKCSICQEEYVTADEVGSLGCEHKYHVVCIQQWLRLKNWCPICKASVASSSSSSSHSH* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0770 545 MobiDBLite consensus disorder prediction 173 187 - -
Mal2g0770 545 SMART ring_2 490 530 IPR001841 -
Mal2g0770 545 MobiDBLite consensus disorder prediction 134 166 - -
Mal2g0770 545 MobiDBLite consensus disorder prediction 236 266 - -
Mal2g0770 545 MobiDBLite consensus disorder prediction 1 188 - -
Mal2g0770 545 MobiDBLite consensus disorder prediction 267 281 - -
Mal2g0770 545 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 535 IPR045191 GO:0061630
Mal2g0770 545 SUPERFAMILY RING/U-box 483 536 - -
Mal2g0770 545 MobiDBLite consensus disorder prediction 27 120 - -
Mal2g0770 545 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED 1 535 - -
Mal2g0770 545 Pfam Ring finger domain 489 531 IPR001841 -
Mal2g0770 545 MobiDBLite consensus disorder prediction 323 348 - -
Mal2g0770 545 ProSiteProfiles Zinc finger RING-type profile. 490 531 IPR001841 -
Mal2g0770 545 MobiDBLite consensus disorder prediction 226 285 - -
Mal2g0770 545 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 449 537 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0770 Mal-Chr2 8958443 8960661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0770 386 531 C3H Transcription Factor Family AT2G15530 43.151 2.55e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0770 - - gmx:100819874 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0770 2 8958443 8960661 Mal2g0770 2 8958443 8960661 ECH
Mal1g5396 1 128131038 128133174 Mal2g0770 2 8958443 8960661 PCT