Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0688 ATGCATGCCATTTCCATGGATTTCTATGGCAACAAAACCCTCCTCACCTTAATGGAAAACGAAAAAACAGAACAACCAGAATCCCCTAACATTCACCTTCATGTCAAAATCCAAACACACAAAGAAACAAACGAACAAGACATTCAATTTAGTCCACCAAGACCTTCTACTACATTTCCACAATCACCATGGACACTTTCCTCTCTTCCTCCTCCATCCCCTTCATTGCTATACCATTGCATCGCCTCCCTCCACCGCCACGAAGGAAACATCTACTCCATCGCAGTTTCCAAAGGTTTTATCTTTACAGGCTCCAACAGTAGCCGTATTCGTGTTTGGAAGAAGCCAGATTGCATGGACAAAGGGTATCTCAAATCAAACTGCGGTGAAATCCGCGCCATTTTAGCTTATAACGACATGGTTTTCTCCTCACACAAGGATCACAAAATCAGAATATGGAACTTCAACGTTTCAGAAAACTTCAAATCCAAGAAAGTAGCTACTCTTCCTAGAAGAAAAAACTCTTTTCTAAACTTCAACAGAACAAAAAACAACAACTCACACAATCACAAACACAAAGATTTAGTTTCTTGCATGGCTTATTACCATTCAGAAGGGTTATTATACACTGGCTCACACGACAGAACAGTGAAAGCTTGGAGAATCTCTGATAGAAAATGCGTTGACTCATTTCTAGCACATGAAGATCATGTAAATGCTATCTTAGTAAACCAAGACGATGGCTGTGTTTTCACATGTTCTTCTGATGGATCAGTGAAAATATGGAGAAGAGTATACACAGAAAACTCACATACATTAACAATGACACTAAAGTTTCAACCTTCACCAGTTAACACGCTTGCATTGAGTTCATCGTTCAACCATTGTTTCCTTTATTCAGGAACTTCAGATGGAATGATAAACTTTTGGGAGAAGGAAAGGTTGTGTTATAGATTCAACCATGGAGGGTTTTTGCAGGGTCACCGATTTGCGGTACTTTGTGTCGAAACGGTAGGGAACATGGTTTTCAGTGGATCAGAGGATACAACAATAAGAGTGTGGAGAAGAGAAGAAGAGAGCTGTTATCATGAGTGTTTGATGGTTTTGGATGGACATAGAGGACCTGTGAGATGTTTGGCTGCATGTCTTGAGATAGAGAAAGTTGTAGTAGGCTTTTTGGTTTATAGTGCTAGTTTGGACCAAACTTTTAAGGTTTGGAGGATTAAGGTTTTTAATGATGATGAAAATGTTTGTTTGGATGTTTTTGGTGAAAATAATAAGTATGAAGGGAAAGTGAAGAAGATTAGAGAGTATGATATGAGTCCTGTTTTGTCACCTTCTTGGGTTGAGAAGAAACTTCAGGGTACAAAGTTACAAGCGTATCATTCATTTTCATTCATAACAATGATCTCATCCTTAATGTTACCATCTGCTACAACGTTAAGACCTTGTTGTAGTTGTAGCATCATTCCATCATCATCTTCATCTTCACGAAGAATTGCTCTTTTTCATCTTCTCACCACCGGTGGTATTGCTCTACCACAATCTCAATTACTCAGTGCAAAAGGATCAGATTTGTTTAAAGTAGCAGAGGCTAATGCTGCAGTAAATCTAGTCCAACCAGACCAAACCTTGTTTAACTGGGTCCAAAATGACAATAGACGATTTCTGCATGTTGTATACAAGGTTGGAGATTTGGACAAGACTATAAAATTCTACACTGAATGCCTTGGCATGAAACTGTTAAGAAAACGTGATATATCAGAAGACAAATATTCAAATGCTTTTCTTGGATATGGGCCTGAAGATTCCAGTTTTACTGTTGAACTTACTTATAATTATGGCGTGGATAACTATGACATTGGAACTGGTTTTGGTCATTTTGGTATTATAGCTGAAGATGTTGCCAAGACAGTAGATATTGTAAAGGCGAAAGGGGGAAAAGTTACTAGAGAACCAGGGTATGTCAAAGGTGGCTCTATAGTAACTGCTTCCGTTGAAGATCCTAGTGGTTATAGGTTTGAGCTTTTGGAGAGAAGACCTACTCGCGAACCCTTATGCAAAGTGATGCTTCGAGTAGGCGATCTCGATCGTGTCATAGCCTTCTATGAAAAAGCTGTTGGCATGAAACTTCTCTACAAGATGGACAACCCGGAGGAAAAGTACACAGTAGCCAAGTTGGGATATGGTCCTGAAGCTAATAGTCCTGTTCTAGAACTGACATATAACTACGGCGTCACTGATTATGACAAAGGAAATGGTTATGCACAGATTGCGATAGGCACGAATGATGTCTATAAGACTGCAGAAGCAATCAAATCATGTGGAGGGAAGATTATCCGCGAGCCTGGACCCTTACCTGGTATCAACACCAAGATCGTTGTTTGCTTGGACCCTGATGGTTGGAAATTGGTATTTGTTGATAATGTTGATTTTCTGAAGGAATTAGAGTGA 2454 0.3949 MHAISMDFYGNKTLLTLMENEKTEQPESPNIHLHVKIQTHKETNEQDIQFSPPRPSTTFPQSPWTLSSLPPPSPSLLYHCIASLHRHEGNIYSIAVSKGFIFTGSNSSRIRVWKKPDCMDKGYLKSNCGEIRAILAYNDMVFSSHKDHKIRIWNFNVSENFKSKKVATLPRRKNSFLNFNRTKNNNSHNHKHKDLVSCMAYYHSEGLLYTGSHDRTVKAWRISDRKCVDSFLAHEDHVNAILVNQDDGCVFTCSSDGSVKIWRRVYTENSHTLTMTLKFQPSPVNTLALSSSFNHCFLYSGTSDGMINFWEKERLCYRFNHGGFLQGHRFAVLCVETVGNMVFSGSEDTTIRVWRREEESCYHECLMVLDGHRGPVRCLAACLEIEKVVVGFLVYSASLDQTFKVWRIKVFNDDENVCLDVFGENNKYEGKVKKIREYDMSPVLSPSWVEKKLQGTKLQAYHSFSFITMISSLMLPSATTLRPCCSCSIIPSSSSSSRRIALFHLLTTGGIALPQSQLLSAKGSDLFKVAEANAAVNLVQPDQTLFNWVQNDNRRFLHVVYKVGDLDKTIKFYTECLGMKLLRKRDISEDKYSNAFLGYGPEDSSFTVELTYNYGVDNYDIGTGFGHFGIIAEDVAKTVDIVKAKGGKVTREPGYVKGGSIVTASVEDPSGYRFELLERRPTREPLCKVMLRVGDLDRVIAFYEKAVGMKLLYKMDNPEEKYTVAKLGYGPEANSPVLELTYNYGVTDYDKGNGYAQIAIGTNDVYKTAEAIKSCGGKIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0688 817 TIGRFAM glyox_I: lactoylglutathione lyase 544 687 IPR004361 GO:0004462|GO:0046872
Mal2g0688 817 TIGRFAM glyox_I: lactoylglutathione lyase 686 810 IPR004361 GO:0004462|GO:0046872
Mal2g0688 817 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 556 676 IPR004360 -
Mal2g0688 817 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 689 805 IPR004360 -
Mal2g0688 817 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 554 685 IPR029068 -
Mal2g0688 817 ProSiteProfiles Trp-Asp (WD) repeats profile. 189 230 IPR001680 GO:0005515
Mal2g0688 817 PANTHER OS01G0232200 PROTEIN 6 453 - -
Mal2g0688 817 CDD WD40 80 407 - -
Mal2g0688 817 SMART WD40_4 117 154 IPR001680 GO:0005515
Mal2g0688 817 SMART WD40_4 224 263 IPR001680 GO:0005515
Mal2g0688 817 SMART WD40_4 183 221 IPR001680 GO:0005515
Mal2g0688 817 SMART WD40_4 270 311 IPR001680 GO:0005515
Mal2g0688 817 SMART WD40_4 318 355 IPR001680 GO:0005515
Mal2g0688 817 SMART WD40_4 362 407 IPR001680 GO:0005515
Mal2g0688 817 SMART WD40_4 77 114 IPR001680 GO:0005515
Mal2g0688 817 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 6 453 IPR045182 -
Mal2g0688 817 CDD GlxI_Ni 557 677 - -
Mal2g0688 817 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 231 262 - -
Mal2g0688 817 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 687 809 IPR029068 -
Mal2g0688 817 SUPERFAMILY WD40 repeat-like 79 411 IPR036322 GO:0005515
Mal2g0688 817 Gene3D - 64 183 IPR015943 GO:0005515
Mal2g0688 817 Gene3D - 184 322 IPR015943 GO:0005515
Mal2g0688 817 ProSiteProfiles Trp-Asp (WD) repeats profile. 325 364 IPR001680 GO:0005515
Mal2g0688 817 Pfam WD domain, G-beta repeat 226 262 IPR001680 GO:0005515
Mal2g0688 817 Pfam WD domain, G-beta repeat 364 406 IPR001680 GO:0005515
Mal2g0688 817 Pfam WD domain, G-beta repeat 324 354 IPR001680 GO:0005515
Mal2g0688 817 Pfam WD domain, G-beta repeat 190 220 IPR001680 GO:0005515
Mal2g0688 817 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 685 809 IPR037523 -
Mal2g0688 817 ProSiteProfiles Trp-Asp (WD) repeats profile. 231 262 IPR001680 GO:0005515
Mal2g0688 817 ProSiteProfiles Trp-Asp (WD) repeats profile. 84 114 IPR001680 GO:0005515
Mal2g0688 817 Gene3D - 323 529 IPR015943 GO:0005515
Mal2g0688 817 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 189 223 - -
Mal2g0688 817 Gene3D - 530 681 IPR029068 -
Mal2g0688 817 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 555 679 IPR037523 -
Mal2g0688 817 ProSitePatterns Glyoxalase I signature 1. 558 579 IPR018146 GO:0004462|GO:0046872
Mal2g0688 817 Gene3D - 682 817 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0688 Mal-Chr2 8062076 8067017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0688 686 808 Calmodulin-binding Proteins AT1G08110 25.676 1.78e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0688 2 8062076 8067017 Mal2g0688 2 8062076 8067017 ECH