Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0669 ATGGAAGCTCAAGAGTTTTTCCAAACCAGCAACAATTCCACAACCAACAATGTAAACACTGCTGCTTCCGACCACTTTATCGTTGAAGATCTCTTTGATTTCTCTAATGACGATGCTGCCATTGAGGACCCCACTTTCGAAGAATCTCCTCCTACAAACTCTAATGATTCTCCTCCTCCTCCTCCTCTTGAAACAAACCCCACTTCCAATTTTTTCACCGACAATTCGTGCCAGAATTCTGCCAACGGTCCTTTCTCCGGCGAACTCTCCGTTCCGTATGATGATCTTGCAGAGCTAGAATGGATGTCCAAATTTGCTGAGGAATCATTTTCAAGTGAGGACCTACACAAGCTACAACTGATATCTGGTGTGACGGCATCAAAAACCCATGAAGAATCCAATCCAACTTTTCACCCTCAAGGGTCTGTCCCAGCTAAAGCCCGCAGTAAGCGCTCACGTGTGCCTCCATGCAACTGGACGTCGCGCCTTCTAGTTCTCTCTCCAACTACCACTTCTCACTCTGACACCATGGCTCCACCAAAAAGGCCCTCTCCAAGAAAGAGAGACACCGCCGATGAAGGAGAGGGCCGCAAATGTCTTCACTGCGCCACTGATAAAACTCCGCAGTGGCGCACCGGACCATTAGGTCCAAAGACACTTTGCAATGCGTGTGGGGTCAGGTACAAGTCAGGTCGACTTGTACCTGAGTATAGGCCTGCAGCAAGCCCAACATTTGTGTTGACTAAGCACTCCAACTCACATAGAAAGGTGCAAGAGCTCCGGCGCCAGAAGGAGATGATGAGAGCCCAACAACACCAATTGTTGCAACTACAACATCATCACAGCATTATGTTTGAAGGACCATCCAACGGTGATGATTACTTGATCCATCAACACGTGGGACCCGATTTCACGCACCTCATGTAG 927 0.4844 MEAQEFFQTSNNSTTNNVNTAASDHFIVEDLFDFSNDDAAIEDPTFEESPPTNSNDSPPPPPLETNPTSNFFTDNSCQNSANGPFSGELSVPYDDLAELEWMSKFAEESFSSEDLHKLQLISGVTASKTHEESNPTFHPQGSVPAKARSKRSRVPPCNWTSRLLVLSPTTTSHSDTMAPPKRPSPRKRDTADEGEGRKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVQELRRQKEMMRAQQHQLLQLQHHHSIMFEGPSNGDDYLIHQHVGPDFTHLM* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0669 308 MobiDBLite consensus disorder prediction 168 196 - -
Mal2g0669 308 CDD ZnF_GATA 198 245 IPR000679 GO:0006355|GO:0043565
Mal2g0669 308 ProSitePatterns GATA-type zinc finger domain. 199 224 IPR000679 GO:0006355|GO:0043565
Mal2g0669 308 MobiDBLite consensus disorder prediction 180 196 - -
Mal2g0669 308 MobiDBLite consensus disorder prediction 1 20 - -
Mal2g0669 308 PIRSF Txn_fac_GATA_plant 1 287 IPR016679 GO:0003677|GO:0005634|GO:0045893
Mal2g0669 308 Gene3D - 189 273 IPR013088 GO:0006355|GO:0008270
Mal2g0669 308 PANTHER GATA TRANSCRIPTION FACTOR 1 308 - -
Mal2g0669 308 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 194 256 - -
Mal2g0669 308 MobiDBLite consensus disorder prediction 127 155 - -
Mal2g0669 308 ProSiteProfiles GATA-type zinc finger domain profile. 193 229 IPR000679 GO:0006355|GO:0043565
Mal2g0669 308 Pfam GATA zinc finger 199 232 IPR000679 GO:0006355|GO:0043565
Mal2g0669 308 MobiDBLite consensus disorder prediction 37 86 - -
Mal2g0669 308 MobiDBLite consensus disorder prediction 67 86 - -
Mal2g0669 308 Coils Coil 257 277 - -
Mal2g0669 308 PANTHER GATA TRANSCRIPTION FACTOR 1 308 - -
Mal2g0669 308 SMART GATA_3 193 243 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0669 Mal-Chr2 7849891 7854086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0669 24 308 C2C2-Gata Transcription Factor Family AT4G32890 47.484 4.73e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal2g0669 GATA 1.5e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0669 - - gmx:100776588 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0669 2 7849891 7854086 Mal2g0669 2 7849891 7854086 ECH