Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0642 ATGTCCAAACTACCCCTCTTCATGTCAAAATTCCTATTTCTTTTCTTCTTCTTGCTAACATTCATATTACCCTCCAAAGTAATTTCACAACTCACAACCACCGAACAAACACTCCTTCTCAATCTCAAACGTCAACTGAATAACCCACCGTCGCTTCAATCATGGAAACTGTCGTCATCTTCGCCGTGCAACTGGCCGGCGATCAATTGCACCGGCGGAACTGTGACGGAGCTTCTCCTCCTAAACAAAAACATCACCATACAGAAACTCCCTTCCATAATCTGCAACCTCAAAAACCTCACCAAGCTTGATCTTTCCAACAACTCCATCGCCGGTGAGTTTCCGACGTGGCTGTATAATTGCTCCAACCTCCGGTACCTTGATCTCTCTCAGAACTACTTCGCCGGCCAAATGCCTAACGACATCAACAACCTCAAAACACTGACGTACCTTAACCTCGGTGGAAACAGTTTCACCGGCGATATCCCGGCGTCAATCGGAAAACTTCAAAATCTTCAAACACTTCACCTCTTTCAAAACAATTTCAACGGAACTTTCCCGAAGGAAATCGGAGATTTATCAAGTCTCGAAATTCTCGGTTTAGCTTATAACTTCAAGCTCAAACCAATGGCGATTCCGATTGAATTTGCAAAATTGAAGAGCTTAAAATTCATGTGGTTTAAACAGTGTAACTTGATCGGGAACATTCCAGAAAGTTTCGAGAATCTCACGAATCTTGAACAGTTGGATTTGTCGATCAACAATTTGACAGGAAACATACCTAGAAATTTGTTCTTGCTGAAAAAATTGAATTCTCTGTTCCTTTACCGTAATAGCTTATTTGGTGTGATACCTAATTCGGTTAAGGCTTTGAATTTGACACACATAGATTTAGCAATGAACAATTTAACTGGTTCTATACCAGAAGAATTTGGTAAGTTGCGGAATTTGATGTTTCTGCACTTATATTCAAATCAGTTATCTGGTGAGATTCCTAGTAGTTTAGGGCTAATACCAAATTTGAGGAATTTTAGGGTTTTTGAGAATAAGCTGAATGGAACATTGCCTTCAGAATTAGGAAGGTATTCAAAGCTTGTGGCTTTTGAAGTTGCTGAAAATGAACTGGTTGGTGGGTTGCCAGAACATTTGTGTGATGGTGGTGCTTTGTTGGGTGTGATTGCTTTTTCAAATAATCTCAGTGGAAACTTGCCAAATTCGTTTGAGAATTGTGGTTCTGTTACCACCATTCAGCTTTACAAAAATAGATTTTCAGGGGCAGTTCCTTTTGGTTTGTGGAATTTGAAGAAATTATCAACTTTGATGTTAAGTGATAACTTGTTTTCTGGTAAACTTCCAAGTAAATTATCATGGAACATGTCTAGACTTGAGATTAGAAACAACAACTTTTCAGGTCAGATATCTGTTGGAGTTTCTTCTGCTTTAAATTTGGTAGTTTTTGATGCAAGAAACAACATGTTTTCTGGTGAGTTTCCAAGGGAATTAACGGGTTTATCGCGGCTCACTACTCTCATGCTTGATGGTAATCAACTCTCTGGAACACTTCCATCGGAGATAATATCATGGCAATCGCTTAATACTCTAACAATCTCCAGAAACAAAATTTCGGGTCAAATACCTGTTGCCATGTCTTCTCTTCCTAACCTTGTTTACTTGGATTTGTCTGAAAATAACATAACTGGTGAAATCCCACCTCAGCTCGTGAAGTTGAGGTTTATTTTTCTCAACTTGTCCTCCAACAAGATTACAGGTGACATCCCTGATGAGTTTGACAACCTTGCATATGAAAATAGTTTCTTGAACAATCCTCAACTGTGTGCTCAGAATGAAAATTTCAACCTTTCAAGCTGCTTGACAAAAACTACGCCACACTCCAGGAGCAATTCATCTTCAAAATCGAAAGTCCTTGTTCTGATTCTTGTTGTTACCGTCATTGTGTTGCTGGCAGCAGCTTCTTTAGCCTTCTGCAAGTTGAAAAAGCACTGCGGCAAAAAGCCTTGTGGGCGTAAGCTTTCGACATGGAGGCTTACCTCATTCCAGAGGCTTGATCTCACGGAAATAAATATATTCTCAAGTTTGACAGATAATAACCTCATAGGAAGTGGAGGGTTTGGGAAAGTTTATCGGATAGCTTTAACTCGTCCAGGTGAGTACATTGCAGTAAAGAAGATTTGGAATGTCAAAGATGTTGATGACAAACTGGATAAAGAATTTATGGCTGAGGTTGAAATCTTGGGAAATATTAGGCATTCCAATATAGTGAAGCTTTTGTGTTGTTATTCAAGTGATAGCTCCAAACTTCTTGTTTATGAATACATGGAAAATCTTAGCCTGGATAAGTGGCTGCATAGAAAGAAGAAGAAAACATCAGTTTCTGGGTTGAGTTCACACACCGAGAATCAATTGGTGTTGAGTTGGCCAACGAGATTGAACGTTGCCATTGGTGCTGCACAAGGCTTGTGTTACATGCACCATGAATGTTCAATGCCAATCATTCACAGAGATGTCAAGTCTAGCAATATACTGCTTGACTCTGAGTTCAAGGCGTGTATAGCAGATTTTGGGCTCGCCAAGTTGTTGGTGAAGAATGGAGAACCATACACCGCATCTGTTCTAGCAGGGTCTTTCGGCTACATTCCACCAGAATATGCATATTCAACCAGGATTGATGAGAAAGTTGATGTGTACAGCTTTGGAGTTGTGCTCCTAGAGCTAGTGACGGGAAGAGAGCCAAATAATGGAGGTGAGAATGCATGCAGTCTGGTTGATTGGGCATGGCAGCATTGTAATGAAGGGAAATTCATCACTGATGCATTTGATGAGGTTATTAGAGAAACACGTTATGCAGCAGAGATGACTACCGTCTTCAAATTAGGCCTCATGTGCACAAGCACATTACCCTCCACTAGACCTTCCACAAAGGAGATTTTGCAAGTTCTTCGTCAGTGTTGTTCTTCAAGTTCTGCACGTAAAAGAGTGTCAACTGAATTTGATATCACTCCTCTTCTTGGCAATACAACTTACATTTCCAGTTACAAGGATAGTAGGACTGGAAGTGAAAAAGAAGAAAGTTGCTTATATAGTGTGTAA 3108 0.4009 MSKLPLFMSKFLFLFFFLLTFILPSKVISQLTTTEQTLLLNLKRQLNNPPSLQSWKLSSSSPCNWPAINCTGGTVTELLLLNKNITIQKLPSIICNLKNLTKLDLSNNSIAGEFPTWLYNCSNLRYLDLSQNYFAGQMPNDINNLKTLTYLNLGGNSFTGDIPASIGKLQNLQTLHLFQNNFNGTFPKEIGDLSSLEILGLAYNFKLKPMAIPIEFAKLKSLKFMWFKQCNLIGNIPESFENLTNLEQLDLSINNLTGNIPRNLFLLKKLNSLFLYRNSLFGVIPNSVKALNLTHIDLAMNNLTGSIPEEFGKLRNLMFLHLYSNQLSGEIPSSLGLIPNLRNFRVFENKLNGTLPSELGRYSKLVAFEVAENELVGGLPEHLCDGGALLGVIAFSNNLSGNLPNSFENCGSVTTIQLYKNRFSGAVPFGLWNLKKLSTLMLSDNLFSGKLPSKLSWNMSRLEIRNNNFSGQISVGVSSALNLVVFDARNNMFSGEFPRELTGLSRLTTLMLDGNQLSGTLPSEIISWQSLNTLTISRNKISGQIPVAMSSLPNLVYLDLSENNITGEIPPQLVKLRFIFLNLSSNKITGDIPDEFDNLAYENSFLNNPQLCAQNENFNLSSCLTKTTPHSRSNSSSKSKVLVLILVVTVIVLLAAASLAFCKLKKHCGKKPCGRKLSTWRLTSFQRLDLTEINIFSSLTDNNLIGSGGFGKVYRIALTRPGEYIAVKKIWNVKDVDDKLDKEFMAEVEILGNIRHSNIVKLLCCYSSDSSKLLVYEYMENLSLDKWLHRKKKKTSVSGLSSHTENQLVLSWPTRLNVAIGAAQGLCYMHHECSMPIIHRDVKSSNILLDSEFKACIADFGLAKLLVKNGEPYTASVLAGSFGYIPPEYAYSTRIDEKVDVYSFGVVLLELVTGREPNNGGENACSLVDWAWQHCNEGKFITDAFDEVIRETRYAAEMTTVFKLGLMCTSTLPSTRPSTKEILQVLRQCCSSSSARKRVSTEFDITPLLGNTTYISSYKDSRTGSEKEESCLYSV* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0642 1035 Gene3D Ribonuclease Inhibitor 210 290 IPR032675 -
Mal2g0642 1035 Gene3D Ribonuclease Inhibitor 32 209 IPR032675 -
Mal2g0642 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Mal2g0642 1035 SUPERFAMILY L domain-like 43 378 - -
Mal2g0642 1035 Gene3D Transferase(Phosphotransferase) domain 1 779 1006 - -
Mal2g0642 1035 SMART LRR_typ_2 97 121 IPR003591 -
Mal2g0642 1035 SMART LRR_typ_2 314 338 IPR003591 -
Mal2g0642 1035 SMART LRR_typ_2 243 267 IPR003591 -
Mal2g0642 1035 SMART LRR_typ_2 504 528 IPR003591 -
Mal2g0642 1035 SMART LRR_typ_2 169 193 IPR003591 -
Mal2g0642 1035 SMART LRR_typ_2 552 576 IPR003591 -
Mal2g0642 1035 SMART LRR_typ_2 434 458 IPR003591 -
Mal2g0642 1035 Pfam Protein kinase domain 701 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g0642 1035 CDD STKc_IRAK 705 986 - -
Mal2g0642 1035 Gene3D Phosphorylase Kinase; domain 1 681 778 - -
Mal2g0642 1035 Pfam Leucine rich repeat 147 204 IPR001611 GO:0005515
Mal2g0642 1035 Pfam Leucine rich repeat 505 565 IPR001611 GO:0005515
Mal2g0642 1035 Pfam Leucine rich repeat 79 133 IPR001611 GO:0005515
Mal2g0642 1035 ProSitePatterns Protein kinases ATP-binding region signature. 705 729 IPR017441 GO:0005524
Mal2g0642 1035 Pfam Leucine rich repeat N-terminal domain 37 70 IPR013210 -
Mal2g0642 1035 ProSiteProfiles Protein kinase domain profile. 699 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g0642 1035 SUPERFAMILY Protein kinase-like (PK-like) 693 986 IPR011009 -
Mal2g0642 1035 SUPERFAMILY RNI-like 292 599 - -
Mal2g0642 1035 Gene3D Ribonuclease Inhibitor 384 457 IPR032675 -
Mal2g0642 1035 ProSiteProfiles Leucine-rich repeat profile. 245 267 IPR001611 GO:0005515
Mal2g0642 1035 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 16 1003 - -
Mal2g0642 1035 Gene3D Ribonuclease Inhibitor 291 383 IPR032675 -
Mal2g0642 1035 ProSiteProfiles Leucine-rich repeat profile. 554 577 IPR001611 GO:0005515
Mal2g0642 1035 SMART serkin_6 699 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g0642 1035 Gene3D Ribonuclease Inhibitor 458 646 IPR032675 -
Mal2g0642 1035 PRINTS Leucine-rich repeat signature 243 256 - -
Mal2g0642 1035 PRINTS Leucine-rich repeat signature 100 113 - -
Mal2g0642 1035 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 16 1003 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0642 Mal-Chr2 7574959 7578142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0642 23 1009 Receptor kinase-like Gene Family AT5G25930 54.747 0.0 1045
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal2g0642 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0642 K00924 - adu:107461025 1371.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0642 2 7574959 7578142 Mal2g0642 2 7574959 7578142 ECH