Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0606 ATGGAGTTCTATGATGGAGATTTCATGGAGGAATTAATGGCTCTAAGAAGAGAAACATGGGAAACTACAAATCCAATTCAAGAAGAAAATCAATTCTTCTCATCATCAAGTAACAACTTGAATTTAGATAACTGTTTTGATCAAAACTCTTTATCTTATCTACCAAACTCTTCTTGTAGTCAACAAGTTCCTCAAAGCTACAACAACAATGAGCACTATAGTAACACTTTCAATGAAATCTATGGTTCTTTACTTGATGAATCTTCAACACCACAGATTCTTGATTCATACTATAATAATAGTATTGACACTCCATTTATTTCTCAAGAAGACTTTCCACTGTCCATGATGGGAGAAGAAGATCAAAGTTTGCTTGATGAAGAGCTTCAGAATTTGGAGCTGCAAACAACTTGCAAAATGGAGCCAACACAATCACCTGAAATGCCAGTAGTTTTCAACACTGGTAATGGTTTGGAAAGAAAGAACCGATCGAAGAAACTTCAAGGACAACCGTCGAAGAATCTAATGGCTGAAAGGAGAAGACGAAAGAGGTTAAACGATCGCCTTTCGATGCTACGCGCAATTGTCCCTAAGATAAGCAAGATGGACAGAACAGCTATACTTGGAGATACTATTGATTACATGAAAGAGCTTCTAGAGAAAATCAACAATCTGCAACAAGAAATTGAACTAGATTCAGATATGACAGGCATTGTCAAAGATGTAAAGCCTAATGAAATCTTAATCAGAAATTCTCCAAAGTTTGAGGTGGATAGAAGTGCAGACACAAGGGTTGAAATTTGTTGTGCAGGGAAGCCAGGGTTGTTGCTATCCACAGTAAACACATTGGAAGCATTAGGCCTTGAGATTCAACAATGTGTTATCAGCTGTTTCAATGATTTCACAATGCAGGCTTCTTGCTCAGAGGAATTGGAGAAAAGGGCAATGCTAAGTTCTGAAGACATTAAGCAAGCCTTATTCAGAAGTGCAGGGTATGGAGGAAGATGCTTGTGA 1014 0.3767 MEFYDGDFMEELMALRRETWETTNPIQEENQFFSSSSNNLNLDNCFDQNSLSYLPNSSCSQQVPQSYNNNEHYSNTFNEIYGSLLDESSTPQILDSYYNNSIDTPFISQEDFPLSMMGEEDQSLLDEELQNLELQTTCKMEPTQSPEMPVVFNTGNGLERKNRSKKLQGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTAILGDTIDYMKELLEKINNLQQEIELDSDMTGIVKDVKPNEILIRNSPKFEVDRSADTRVEICCAGKPGLLLSTVNTLEALGLEIQQCVISCFNDFTMQASCSEELEKRAMLSSEDIKQALFRSAGYGGRCL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0606 337 Gene3D - 158 233 IPR036638 GO:0046983
Mal2g0606 337 Pfam Helix-loop-helix DNA-binding domain 175 218 IPR011598 GO:0046983
Mal2g0606 337 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 337 - -
Mal2g0606 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 230 IPR036638 GO:0046983
Mal2g0606 337 CDD ACT_UUR-ACR-like 263 304 - -
Mal2g0606 337 PANTHER DNA BINDING PROTEIN 3 337 - -
Mal2g0606 337 SMART finulus 175 224 IPR011598 GO:0046983
Mal2g0606 337 MobiDBLite consensus disorder prediction 155 176 - -
Mal2g0606 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 218 IPR011598 GO:0046983
Mal2g0606 337 Coils Coil 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0606 Mal-Chr2 7000645 7002271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0606 160 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 65.934 3.40e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g0606 HLH 2.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0606 - - cam:101489960 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0606 2 7000645 7002271 Mal2g0606 2 7000645 7002271 ECH