Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0599 ATGGACTTCGACAATATTTTCCTGTTTTTCATGTTACAATGCATCTTGGTTCTATGTTGTTGTACTAATCCAGGGGTGCGATTGGATATTCAAGAAAACTATGTGGTAATGGATAATGGCATAGTCCAAGTCAATTTATCAAATCCTTCAGGATTTGTCACGGGAATTCAATATAATGGAATTGATAATTTGCTTGAAGTTCTTAATCACGAATCTGATAGAGGGTACTGGGATATTGTTTGGGACGAGGGTGGGAATAAAACAACAAAAAAAGGTGCAAAGGGAAAGGGTAGATTTGACAGGATGGAAACCACAAATTTGACGGTGATAGTGGAAAATGAAGAACAAGTTGAGCTATCTTTCACTAGAACATGGAATTTCTCTCTTGAGGGAAAGCTTGCGCCACTCAATATTGATAAAAGGTTTATAATGCTTAGTGGTTCATCTGGGTTCTACACGTATGCAATTTATGAGCATTTGAAGGAATGGCCTGCATTCGATCTTGACAATACTAGGGTTGCATTCAAGCCTAGGAAAGACAAGTTCAATTACATGGTTATAGCGGACGATAGACAAAGATTTATGCCTCTGCCTGATGACCGATTGCCGGGAAGAGGCCAAGTTCTGGCTTACCCGGAGGCTGTCCGCCTTGTCAATCCGGTGGAGCCTGAGTTCAAAGGAGAGGTGGATGATAAGTATGAGTACTCATGTGAGAGTCGAAGCAATCAGGTTCATGGTTGGATTTCCATTAATTCATCGGAATCCATTGGATGTTGGCTAATTACGCCCAGCTATGAGTTCAGATCTGCTGGGCCCTTAAAACAATACCTTGCTTCCCATGTGGGCCCCACCATGCTCTCTGTATTTCATAGCACACATTATTCAGGGTTAGATCTGATCATGAAATTTGGAGAAAATGAACCGTGGAAGAAAGTCTTTGGGCCCATATTCATATACCTTAATTCCATCTCTGATGAATTTAGCCCGATCAAGCTTTGGGAGGACGCCAAACAACAGATGGTCAATGAAGTTGAAAGCTGGCCCTATACATTTCCTGCTTCTGAGGACTTTCTCTCATCTACCCAACGAGGTAAAGTTGAAGGTAGATTGCTTGTCCGAGATAGGTATATAAGTGATGCATTCGTCCCAGTCAGTGGTGCTTATGTGGGATTAGCATCCCCAGGAGATGTTGGATCTTGGCAGAGAGAATACAAGGGCTATCAATTTTGGACCATTACTGATGATAAAGGCTATTTCTCAATAATTAATATACGTCCTGGTGACTATAATCTCTATTCATGGGTCACTGGATTCATCGGTGATTATCAATATAACAGTACTATTAACATAACCTCAGGTTGTGAAATTAATGTGGGTGAGCTTGTTTATGAGCCACCAAGAGATGGCCCTACACTGTGGGAAATAGGCATCCCTGATCGATCAGCTGCTGAGTTCTATGTTCCTGATCCAAATCCCTTGTATGTGAACAGACTTTATGTCAACCATTCAGACAGGTTTAGGCAATATGGTTTGTGGGAGAGATATGCTGATTTGTATCCTAATGAAGACCTAGTTTACACTGTTGGCATAAGTGATTACAAAAAAGATTGGTTTTTTGCTCAAGTTACCAGGAAGAAAGACAACAACACTTACCAAGGAACCACATGGCAAATAAATTTCAATCTTTATTCTGTGAATACAAACGGCACCTACAAATTGCGACTAGCTTTGGCATCTGTACATTATGCGGAGCTACAGATTCGCATAAACAATTCCGATGCAACAATTCCACCTTTATTTTCAACTGAGGTTATTGGAAATGAGAATACTATAGCGAGGCATGGAATTCACGGGTTTTATTGGTTATACAACATTGATGTACAAGGCAGTCTTCTTGTGAAGGGGAACAATACCATCTTTCTAACTCAAGCTAGCACCAATGGTCCTTTTGTAGGGATTTTGTATGATTATATTCGTTTAGAAGGACCCCCTTATATACATTTTAAACATCAAAATTAA 2019 0.4027 MDFDNIFLFFMLQCILVLCCCTNPGVRLDIQENYVVMDNGIVQVNLSNPSGFVTGIQYNGIDNLLEVLNHESDRGYWDIVWDEGGNKTTKKGAKGKGRFDRMETTNLTVIVENEEQVELSFTRTWNFSLEGKLAPLNIDKRFIMLSGSSGFYTYAIYEHLKEWPAFDLDNTRVAFKPRKDKFNYMVIADDRQRFMPLPDDRLPGRGQVLAYPEAVRLVNPVEPEFKGEVDDKYEYSCESRSNQVHGWISINSSESIGCWLITPSYEFRSAGPLKQYLASHVGPTMLSVFHSTHYSGLDLIMKFGENEPWKKVFGPIFIYLNSISDEFSPIKLWEDAKQQMVNEVESWPYTFPASEDFLSSTQRGKVEGRLLVRDRYISDAFVPVSGAYVGLASPGDVGSWQREYKGYQFWTITDDKGYFSIINIRPGDYNLYSWVTGFIGDYQYNSTINITSGCEINVGELVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPLYVNRLYVNHSDRFRQYGLWERYADLYPNEDLVYTVGISDYKKDWFFAQVTRKKDNNTYQGTTWQINFNLYSVNTNGTYKLRLALASVHYAELQIRINNSDATIPPLFSTEVIGNENTIARHGIHGFYWLYNIDVQGSLLVKGNNTIFLTQASTNGPFVGILYDYIRLEGPPYIHFKHQN* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0599 672 Gene3D - 27 297 IPR014718 GO:0030246
Mal2g0599 672 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 662 - -
Mal2g0599 672 Pfam Rhamnogalacturonate lyase family 30 229 IPR010325 -
Mal2g0599 672 Gene3D - 469 661 - -
Mal2g0599 672 PANTHER RHAMNOGALACTURONATE LYASE B-LIKE PROTEIN 1 662 - -
Mal2g0599 672 SUPERFAMILY Galactose-binding domain-like 468 661 IPR008979 -
Mal2g0599 672 CDD RGL4_N 33 322 - -
Mal2g0599 672 SUPERFAMILY Starch-binding domain-like 360 459 IPR013784 GO:0030246
Mal2g0599 672 Pfam Polysaccharide lyase family 4, domain III 471 660 IPR029411 -
Mal2g0599 672 CDD RGL4_C 473 661 - -
Mal2g0599 672 Gene3D - 359 458 - -
Mal2g0599 672 Pfam Polysaccharide lyase family 4, domain II 385 457 IPR029413 -
Mal2g0599 672 CDD RGL4_M 362 461 IPR029413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0599 Mal-Chr2 6930927 6937701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0599 26 663 Polysaccharide Lyase AT1G09890 64.789 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0599 K18195 - gmx:100786488 1154.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0599 2 6930927 6937701 Mal2g0599 2 6930927 6937701 ECH