Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0598 ATGTCTCCACTAGGGGTGCAACTCAGCATTCAAGATCATCATGTGGTGATGGACAATGGCATACTAAGAGTCACTTTATCGAATCCTGAGGGAATTGTCACTGGAATACAGTATAATGACATTGACAACTTGCTTGAAGTGCTGAATGATGAATCTAATAGAGGGTATTGGGACCTTGTTTGGAGCTCTCCAACAAGTACAGGAACCACCGGAAAATTTGATGTGATAAAGGGAACTACATTCAAAGTTATATTGGAAGATGAGGATCAAGTTGAGTTATCTTTCAGCAGGACTTGGGATGCTTCCCTTGAGGGCAAGTTAGTTCCTTTAAATATTGATAAAAGGTTTATAATGCTTCGTGGTTCTTCCGGCTTCTACTCATATGCAATTTATGAGCACTTGGAGGACTGGCCTGCTTTTAATCTTGATGAAACAAGAATTGCTTTCAAGCTTAGAAAAGACAAATTCCATTATATGGCAATGGCAGATAATAGACAGAGGAATATGCCTCTTCCAGATGACAGAGTGCCACCAATAGGCCAAGCACTTGCCTATCCAGAAGCAGTTCTACTTGTCAATCCTATAGAACCAGAACTTAAAGGAGAGGTGGATGATAAGTACCAATATTCATGTGACAACAAAGATAGCCAAGTTCATGGATGGATTTGCATGGATCCTGCTGTTGGATTCTGGCTCATTACGCCTAGCAATGAATTTCGATCTGGTGGACCTGTCAAACAAAACTTAACTTCCCACGTCGGACCTACCACACTTGCTGTGTTTCTCAGTGCTCATTATAGTGGAGAGGATTTAGTGCCTAAGTTCAAAGCTGGTGAGGCATGGAAAAAAGTTTTTGGTCCAGTTTTTATCTATGTCAATTCTCCATATGATGGAAGTGACCCAATTAAGCTATGGGATGATGCTAAGCTGCAGATGTTAATTGAAGTTCAAAGCTGGCCCTACAATTTTCCTGAATCAGATGATTTCCCGAAATGGGACGAACGTGGTAATGTTTGTGGCAGGCTATTGGTTAAAGAGAGGTATATAGAGGATGACTATTTATCAGCAAAAGGTGCTTATGTTGGCTTGGCTCCACCAGGAGATGTTGGATCTTGGCAAAGAGAATGCAAGAATTATCAGTTTTGGGCTAAAGCAGATGATGATGGCTATTTCTCCATCAGCAATATACATGTTGGTGACTATAACTTTTATGCATGGGTACCTGGTTTTATTGGTGACTATAAATATGATGTAGTAGTTAGCATAACAGAAGGTTGTGACATAGACATTGGTGATCTTGTTTATGAGCCACCAAGAGATGGCCCAACACTGTGGGAAATAGGCATTCCTGATCGCTCAGCTGCTGAGTTCTATGTTCCTGATCCAAATCCCAAATATATTAACAAACTTTATGTTAATCATCCTGACAAGTTTAGGCAATATGGGATATGGGAGAGATATGCAGAACTATACCCTGACAAAGATTTGATCTACACAATTGGTGTTAGTGACTACACCAAAGACTGGTTCTTTGCTCAAGTTACCAGGAAGAAAGATGATAATACATATCAAGGAACCACATGGCAAATCAAGTTTAAGCTTGATAATGTGAACAAAAAAGAAAGCTATAAACTTCGAGTGGCTTTGGCATCAGCTACATATTCAGAACTTCAGGTACGAGTTAATGATCCCAAAACAAATCGCCCTTTATTTTCAAGCGGGTTGATAGGAAAGGATAACTCAATTGCTAGGCATGGAATTCATGGTCTTTATTGGCTTTACAATGTGAACATACCAGGTTCTTTACTTGTTGAAGGAGATAATAATACACTCTTTTTGACACAAGCAAGAGGCAATGGTCCATTTCAGGCCATTATGTATGATTATATTCGTTTGGAAGGTCCAGCAACTTCTAGTTTCAATAACAAAATTTGA 1935 0.3953 MSPLGVQLSIQDHHVVMDNGILRVTLSNPEGIVTGIQYNDIDNLLEVLNDESNRGYWDLVWSSPTSTGTTGKFDVIKGTTFKVILEDEDQVELSFSRTWDASLEGKLVPLNIDKRFIMLRGSSGFYSYAIYEHLEDWPAFNLDETRIAFKLRKDKFHYMAMADNRQRNMPLPDDRVPPIGQALAYPEAVLLVNPIEPELKGEVDDKYQYSCDNKDSQVHGWICMDPAVGFWLITPSNEFRSGGPVKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFKAGEAWKKVFGPVFIYVNSPYDGSDPIKLWDDAKLQMLIEVQSWPYNFPESDDFPKWDERGNVCGRLLVKERYIEDDYLSAKGAYVGLAPPGDVGSWQRECKNYQFWAKADDDGYFSISNIHVGDYNFYAWVPGFIGDYKYDVVVSITEGCDIDIGDLVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINKLYVNHPDKFRQYGIWERYAELYPDKDLIYTIGVSDYTKDWFFAQVTRKKDDNTYQGTTWQIKFKLDNVNKKESYKLRVALASATYSELQVRVNDPKTNRPLFSSGLIGKDNSIARHGIHGLYWLYNVNIPGSLLVEGDNNTLFLTQARGNGPFQAIMYDYIRLEGPATSSFNNKI* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0598 644 SUPERFAMILY Starch-binding domain-like 373 429 IPR013784 GO:0030246
Mal2g0598 644 Pfam Rhamnogalacturonate lyase family 8 203 IPR010325 -
Mal2g0598 644 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 638 - -
Mal2g0598 644 SUPERFAMILY Galactose-binding domain-like 440 633 IPR008979 -
Mal2g0598 644 CDD RGL4_N 8 294 - -
Mal2g0598 644 Gene3D - 335 429 - -
Mal2g0598 644 Gene3D - 5 308 IPR014718 GO:0030246
Mal2g0598 644 Pfam Polysaccharide lyase family 4, domain II 357 429 IPR029413 -
Mal2g0598 644 Pfam Polysaccharide lyase family 4, domain III 443 632 IPR029411 -
Mal2g0598 644 Gene3D - 441 633 - -
Mal2g0598 644 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 638 - -
Mal2g0598 644 CDD RGL4_M 334 433 IPR029413 -
Mal2g0598 644 CDD RGL4_C 445 633 - -
Mal2g0598 644 SUPERFAMILY Galactose mutarotase-like 11 294 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0598 Mal-Chr2 6921669 6926248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0598 1 636 Polysaccharide Lyase AT1G09890 70.846 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0598 K18195 - gmx:100793563 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0598 2 6921669 6926248 Mal2g0598 2 6921669 6926248 ECH