Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0597 ATGATTTCTCGATTTCTTGCTCATAGAAAGAAACATAAGGAGGAAGGATCCTTCATCATGTCCGCCCCAGGTGTACGGTTACACTTCCAACAAAACTATGTGGTGATGGATAATGGAATAGTCCAAGTTACATTATCAAATCCAGATGGAATTGTCACTGGAATACGATACAATGGTGTTGATAATTTGCTTGAAGTTCTCAACAAGGAGACTAATAGAGGGTATTGGGATCTTGTTTGGAGTTCACCAGGAAGCAAAGGAATCTTTGATGTGATTAAAGGAACATGTTTCGAAATTATAGTTCAAAATGAGGATCAGGTGGAGCTTTCATTCAAAAGAATGTGGGATCCTTCTCTTGAGGGAAAGTTTGTCCCTTTAAATATTGACAAAAGATTCATTTTGCTCCGTGGTTCATCAGGCTTCTACTCTTATGGAATTTACGAGCACTTACCCGGATGGCCAGATTTTGATATTAGTGAAACAAGGATCACTTTCAAGCTTAGAAAAGACAAGTTTCAGTACATGGCTATGGCAGACGATAGGCGAAGGATTATGCCTTTTCCGGAGGACCGGTTACCAGGAAGATGCCAACCCTTGGCCTACCAAGAAGCTGTCCTACTAGTCAATCCTAAGGATCCACGATTGAAAGGAGAGGTGGATGACAAGTATCAATATTCATGTAAGAACATAGATAACCGAGTCCATGGGTGGATATCTTTCAATCCACCTGTAGGATTCTGGCAGATCACACCTAGTGATGAGTTTCGTTCTGGTGGGCCCCTCAAGCAGAATTTGACCTCACATGTAGGACCTACCACACTTGCCATGTTTCTTAGTGGTCACTATGCTGGACAAGATTTAGTACCCAAATTTAGAGGTGGTGAACCATGGAAGAAGGTTTTTGGTCCTGTATATATTTATCTCAATTCTGGATCATCTGGTTATGACCCACTCTGGCTATGGGAGGATGCAAAAATAAAGATGATGACAGAAGTTCAAAGTTGGCCATATTTATTCCCTGCTTCAGAAGATTTTTTAAAACCGGATCAACGGGGCAACGTTACTGGGAGATTACTTGTCTTAGACAGGTACATCAGCACTGACTTAATGTCAGCAAATGGTGCTTATGTTGGTCTGGCTCCACCAGGAGATGCAGGGTCATGGCAAAGAGAATGCAAGGACTATCAATTCTGGACCAGAGCAGACATGAATGGATTTTTTACGATTAGCAATGTACGTCCAGGTGACTACAACCTTTTTGCCTGGGTACCTGGTTTTATTGGAGACTACAGATTTGGTGATTCTGTGAAGATAACCTCAGGTTCTTACATTGAACTAGGTGAAGTTGTATATGAACCTCCAAGGGATGGCCCCACATTGTGGGAAATAGGTATTCCTGATAGATCCGGTGCAGAATTTTATGCTCCTGATCCCAATCCACAACATATTAATAAGCTTTTTATCAACCATCCAGACAGGTTCAGGCAGTATGGATTGTGGGACAGATATACAGAATTATATCCTGATGCAGATTTGGTTTACACAATTGGTGTTAGTGACTATAGGAAGGATTGGTTTTACGCTCAGGTTCCCAGAAAAAAAGCGGATAACACTCTTCAAGGAACAACTTGGCAAATCAAGTTTGAACTCAGTGGTGTGATTCAAGGAACTACATATAAACTCAGAGTTGCACTTGCATCTGCAACATTAGCTGAATTGCAGATTCGAGTCAATGATCCCAATGCAAGGCGTCCCGTATTTACCACTGGATTAATAGGAAGGGAGAACTCAATTGCAAGATTAGGAATTCATGGACTCTATTGGCTGTACCACGTGAACATACCAAGTTCTCTTCTTATTGATGGCACAAATACTATATTTTTTACACAGCCAAGATGTACCAGTCCTTTCCAGGGTTTCATGTACGACTATATTCGTTTGGAAGGTCCTCCTTGTTTTTAA 1962 0.4123 MISRFLAHRKKHKEEGSFIMSAPGVRLHFQQNYVVMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNKETNRGYWDLVWSSPGSKGIFDVIKGTCFEIIVQNEDQVELSFKRMWDPSLEGKFVPLNIDKRFILLRGSSGFYSYGIYEHLPGWPDFDISETRITFKLRKDKFQYMAMADDRRRIMPFPEDRLPGRCQPLAYQEAVLLVNPKDPRLKGEVDDKYQYSCKNIDNRVHGWISFNPPVGFWQITPSDEFRSGGPLKQNLTSHVGPTTLAMFLSGHYAGQDLVPKFRGGEPWKKVFGPVYIYLNSGSSGYDPLWLWEDAKIKMMTEVQSWPYLFPASEDFLKPDQRGNVTGRLLVLDRYISTDLMSANGAYVGLAPPGDAGSWQRECKDYQFWTRADMNGFFTISNVRPGDYNLFAWVPGFIGDYRFGDSVKITSGSYIELGEVVYEPPRDGPTLWEIGIPDRSGAEFYAPDPNPQHINKLFINHPDRFRQYGLWDRYTELYPDADLVYTIGVSDYRKDWFYAQVPRKKADNTLQGTTWQIKFELSGVIQGTTYKLRVALASATLAELQIRVNDPNARRPVFTTGLIGRENSIARLGIHGLYWLYHVNIPSSLLIDGTNTIFFTQPRCTSPFQGFMYDYIRLEGPPCF* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0597 653 SUPERFAMILY Galactose-binding domain-like 456 648 IPR008979 -
Mal2g0597 653 Gene3D - 26 322 IPR014718 GO:0030246
Mal2g0597 653 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 10 652 - -
Mal2g0597 653 SUPERFAMILY Galactose mutarotase-like 37 312 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mal2g0597 653 Gene3D - 457 648 - -
Mal2g0597 653 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 10 652 - -
Mal2g0597 653 Pfam Rhamnogalacturonate lyase family 26 219 IPR010325 -
Mal2g0597 653 SUPERFAMILY Starch-binding domain-like 350 447 IPR013784 GO:0030246
Mal2g0597 653 CDD RGL4_C 461 648 - -
Mal2g0597 653 Gene3D - 347 446 - -
Mal2g0597 653 Pfam Polysaccharide lyase family 4, domain II 373 445 IPR029413 -
Mal2g0597 653 CDD RGL4_N 32 313 - -
Mal2g0597 653 CDD RGL4_M 350 447 IPR029413 -
Mal2g0597 653 Pfam Polysaccharide lyase family 4, domain III 459 647 IPR029411 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0597 Mal-Chr2 6895285 6902409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0597 20 651 Polysaccharide Lyase AT1G09910 70.886 0.0 958
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0597 K18195 - gmx:100814185 1207.2