Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0562 ATGGGTTGGACAAGAGAAGAGAATAGACGTTTTGAGGATGCACTTGCAGTATATGGTCCAGAAGATCCAAATCGGTGGCAACATGTGGCTAATGCTGTTGGTGGAAAATCCATACAAGAGGTGAAAATGCACTATGAGATCCTTAAGGAAGATCTCATTCGTATTGAGCGTGATCAAATACCACTACCTACTTACAGGGGAGGTGCTGTTAGTATCAATATCAACAATGGAAGACAATTTGGCAATGAGCAAAGGCGAATGAAGAATCTGAATATCCACTGA 282 0.4149 MGWTREENRRFEDALAVYGPEDPNRWQHVANAVGGKSIQEVKMHYEILKEDLIRIERDQIPLPTYRGGAVSININNGRQFGNEQRRMKNLNIH* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0562 93 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Mal2g0562 93 SMART sant 3 51 IPR001005 -
Mal2g0562 93 CDD SANT 3 49 IPR001005 -
Mal2g0562 93 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Mal2g0562 93 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Mal2g0562 93 Coils Coil 38 58 - -
Mal2g0562 93 Gene3D - 2 50 - -
Mal2g0562 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 66 - -
Mal2g0562 93 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
Mal2g0562 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 66 IPR044636 GO:0003700
Mal2g0562 93 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0562 Mal-Chr2 6519017 6524294 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal2g0562 Myb_DNA-binding 3.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0562 - - gmx:100789698 155.992