Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0541 ATGGAATCTACAAATCTCCATCATCTTCAAGACCAACCTCCTCCTCCTCCTCCTCCTCCTCCTGTTTCTTCTTTATCCACTACCCCATCCTATGCTGTTGGAGGAACCACCTCCCACTCTTGGACCCCAAACATCACTTTGAATAATGCAGGGAACATCAACTCAAATAACCTTCAAGAAGCTAATACCAGATCAAGATCATCTTTAACACACAAGAACAGTATGATCCAAGATTTAGGTTATCATCATCATCATCACCAATGGACAAGTGATGCTACTGCAGCAGAGAACTGCTTAAACAGCAACCAGTTCAATCCTAACAACAACTTAGATTCAGAGTTTTCCAAGAACAGTAGTATTAAGGAAGAGATCTCATTTGCTAATTTCCCCAAATTCACTGAAATGCTTAATTACACTCCTCCTAATTCCAACATGGAATGCTATCGAATACTTGATGATCCTTCCACAACAAATACAACACAGATGAAGAATAATCATAATAATGATGATGAACACAAGGATATAAACTCTCTCATGCTAAAGACCCTTTTTACAGGAGGAGACTTTTATAATGCTCAAAACTATCCTAATTTTGGAGGCACAAGTGTTCCAACTCCAAGTAGAGGCAACAATATTAGTAGCCAGATTCACCCGAGTATAAATATCTCTAACTTGAATCATTACTCGTCTTCGTCTGCTACCACATCATTGGACATGAACATGCAGTCATTAGATCTATTGAACCAAAATTCACAAGATCATCATCATCATCTTGGTAGATTTACTACTCATGATCATGAAAACCTTTCTTTTCGTCTTCATCCTATGCAACACCCCACCAACATGTCCTCTTCTACTAACTCTATTAATAATACATCATCACTATTCAGAAATGGCGCGACAGAAACAAAAAGAGGGTGCACCTTGATGGAGTCAAAGGTTTCTCAATCTCAAACGGCGTTGAAGAAATCACGATCTTCATCAGAATCACGCCCTTCATGCCCACCTTTTAAGGTTAGGAAAGAGAAATTAGGAGATAGGATTGCGGCTCTTCAGCAGTTGGTGGCTCCTTTTGGAAAGACAGACACAGCATCCGTACTCATGGAAGCTATCGGATACATTAAATTCCTTCAAGGTCAAGTCGAGACACTAAGTGTTCCCTATATGAAGTCATCGCAGAACCAAAACAACAGAGTGATGCTAGGGGGTTCAGCCAAAGGTGACACAAAGGGAGAACCAAAACAAGACCTGAGAAGTCGAGGCCTCTGTCTCGTGCCATTGTCATGCATGTCATACATAGCTGGTGATGGCAGCACTGAGGTGTGGCAACAACGCCCAAATTTTGGTGGACCAGCTTAA 1359 0.4099 MESTNLHHLQDQPPPPPPPPPVSSLSTTPSYAVGGTTSHSWTPNITLNNAGNINSNNLQEANTRSRSSLTHKNSMIQDLGYHHHHHQWTSDATAAENCLNSNQFNPNNNLDSEFSKNSSIKEEISFANFPKFTEMLNYTPPNSNMECYRILDDPSTTNTTQMKNNHNNDDEHKDINSLMLKTLFTGGDFYNAQNYPNFGGTSVPTPSRGNNISSQIHPSINISNLNHYSSSSATTSLDMNMQSLDLLNQNSQDHHHHLGRFTTHDHENLSFRLHPMQHPTNMSSSTNSINNTSSLFRNGATETKRGCTLMESKVSQSQTALKKSRSSSESRPSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQGQVETLSVPYMKSSQNQNNRVMLGGSAKGDTKGEPKQDLRSRGLCLVPLSCMSYIAGDGSTEVWQQRPNFGGPA* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0541 452 MobiDBLite consensus disorder prediction 10 25 - -
Mal2g0541 452 MobiDBLite consensus disorder prediction 311 333 - -
Mal2g0541 452 MobiDBLite consensus disorder prediction 311 338 - -
Mal2g0541 452 CDD bHLH_AtbHLH_like 337 385 IPR045239 -
Mal2g0541 452 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 338 391 IPR036638 GO:0046983
Mal2g0541 452 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 328 377 IPR011598 GO:0046983
Mal2g0541 452 Gene3D - 338 400 IPR036638 GO:0046983
Mal2g0541 452 PANTHER TRANSCRIPTION FACTOR BHLH110 4 215 - -
Mal2g0541 452 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 215 - -
Mal2g0541 452 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 204 438 - -
Mal2g0541 452 MobiDBLite consensus disorder prediction 26 44 - -
Mal2g0541 452 PANTHER TRANSCRIPTION FACTOR BHLH110 204 438 - -
Mal2g0541 452 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0541 Mal-Chr2 6355404 6360617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0541 34 450 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 36.797 4.17e-55 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0541 - - mtr:MTR_3g112170 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0541 2 6355404 6360617 Mal2g0541 2 6355404 6360617 ECH