Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0540 ATGTCAAAATCAATGGAACTCCCTGATTGTATCTATCCATGCCAAGCAGTCACTAATATTACACCAAGTGCTCCAACACCAAACCATTCTCTCTATCTTTCTAATCTTGATGACCAAAAGTTTCTTAGATTCTCCATAAAGTATTTGTACATTTTCAAGAAATCTGTGAATTTGGATCATTTGAAGTGTTCTCTGTCTAGAGTTTTAGTGGATTATTACCCTTTAGCTGGGAGGTTGAGAAGTTGTTCCTCCTCTAATTTGGGTGATGAAAAGAAGCTTGAGGTGGATTGCAATGGAGAAGGTGCTTTGTTTGTTGAGGCTTTTATGGCTATCACTGCTCAAGAATTACTTGAACCTTCTAAGTTGCCAAACAAGTCATGGAGGAAATTCACGTATAAGGTTGAATCTCAAAGTTTCTTAGATGTTCCTCCTCTTATAGTTCAGTTAACAAGTCTACGTTGTGGGGGAATGATCCTGTGCACCGCAATCAACCACTCCCTATGCGATGGAATCGGCACATCTCAATTTCTACACTCATGGGCACAACTCACTAAAAATCCTCAAGCCAATTTGACCTTTCCACCCTTCCACTGGCGACACGTGTTGAAACCACGACACCCTCCCATGGTAAACCTCCCCAATCCCGGATACACCAGAACACAGCCAACCCCTCAAGTAAACATCCTCAAGTTAATACAATCACAACCCTTAGTACCTACATCATTTATCTTTAATCCCTCCCATGTCCTCTACTTAAAGAAACAATGTGTCCCTTCACTTAAGTGCACTACATTTGAAGTAGTGGCAGCACACACGTGGCGCTCTTGGATTCGTTCAATGAACTTATCCTTACCCTCCACTCTAAATGTGAAGCTACTTTTCTCTATTAACATTCGCACCATAATGAACCTACCAAAAGGATATTACGGAAATGGGTTTCTATTAGGATGTGCTGAAAGTACTATAAAGGACTTAGTAGAGAATAATTTGCATCATGGTGTGAAGTTAGTACAAAAGGCTAAATCAACGGTTAATGATGAGGAATATATAAGATCAACGGTTGATTTGTTGGAGGATAAAACGGTAAAAACGGATGTTTCAACTAGTTTGGTTATATCACAATGGTCTAAACTTGGGTTAGAAGAGGTGGATTTTGGAGAGGGAAAAGCGTTACATATGGGTCCTTTAACAAGTGATGTTTATTGCTTGTTTTTACCGGTTGTTGGTGGTGATGCTAATGCTGTGAGAGTGGTTGTTTCTGTGCCGGAGAATATGGTCGAAAATTTTCAATATTATATGAAGGAAAGCTGGGAAAAGAAAATACAAAATGGAGATCATGTTAAGAATGGCTATCATGCACATGAAAATCCATTTTACTAA 1380 0.3928 MSKSMELPDCIYPCQAVTNITPSAPTPNHSLYLSNLDDQKFLRFSIKYLYIFKKSVNLDHLKCSLSRVLVDYYPLAGRLRSCSSSNLGDEKKLEVDCNGEGALFVEAFMAITAQELLEPSKLPNKSWRKFTYKVESQSFLDVPPLIVQLTSLRCGGMILCTAINHSLCDGIGTSQFLHSWAQLTKNPQANLTFPPFHWRHVLKPRHPPMVNLPNPGYTRTQPTPQVNILKLIQSQPLVPTSFIFNPSHVLYLKKQCVPSLKCTTFEVVAAHTWRSWIRSMNLSLPSTLNVKLLFSINIRTIMNLPKGYYGNGFLLGCAESTIKDLVENNLHHGVKLVQKAKSTVNDEEYIRSTVDLLEDKTVKTDVSTSLVISQWSKLGLEEVDFGEGKALHMGPLTSDVYCLFLPVVGGDANAVRVVVSVPENMVENFQYYMKESWEKKIQNGDHVKNGYHAHENPFY* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0540 459 Pfam Transferase family 19 433 - -
Mal2g0540 459 Gene3D - 230 434 IPR023213 -
Mal2g0540 459 Gene3D - 14 219 IPR023213 -
Mal2g0540 459 PANTHER BNAC03G58010D PROTEIN 15 441 - -
Mal2g0540 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0540 Mal-Chr2 6340709 6343456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0540 18 395 Monolignol Biosynthesis Gene Families AT5G48930 28.040 1.47e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0540 - - gmx:100810619 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0540 2 6340709 6343456 Mal2g0540 2 6340709 6343456 ECH