LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g0538	ATGGGAATGGCGACTCCGGTTGAGCCTCCGAACGGGATAAGAATTGAAGGAAAGCATTATTTTTCCATGTGGCAAACCCTGTTTGAGATTGACACCAAATATGTGCCGATTAAGCCGATTGGTCGAGGAGCGTATGGGATTGTTTGTTCTTCTGTCAATAGAGAAACCAATGAGAAAGTTGCAATCAAGAAGATACAGAACGCGTTTGAGAATCGCGTTGATGCTCTTAGAACTTTGCGCGAATTGAAACTTCTTCGACATCTTCACCATGAGAATGTTATTGCTTTGAAAGACATCATGATGCCTATTCATAGGAATAATTTCAAGGATGTTTATCTGGTTTATGAACTCATGGACACCGATTTGCATCAGATTATTAAGTCTTCCCAAGCACTGTCTAATGATCACTGCCAATATTTCCTCTTTCAGTTGCTTCGGGGCTTGAAATATCTACACTCAGCGAACATCCTTCATCGTGACTTGAAACCTGGCAATCTTCTAATTAATGCAAACTGTGACCTAAAAATATGTGATTTTGGGTTAGCACGCACAAACTGCAGCAAGAACCAGTTCATGACGGAGTATGTTGTCACTCGGTGGTATAGGGCACCAGAACTCCTACTTTGCTGTGACAACTACGGGACATCTATTGATGTATGGTCTGTGGGATGCATTTTTGCTGAGCTTCTTGGACGGAAACCTATTTTCCCTGGTTCAGAGTGTCTCAACCAACTAAAACTTATTATCAATATCCTTGGTAGTCAAAGGGAGGAGGATATTGAATTTATTGATAATCCAAAGGCAAAGAGGTACATCAAATCACTTCCATATTCTCCAGGAACTCCCTTTTCCAGACTTTACCCCAATGCACATCCATTGGCAATAGATCTATTGGCAAAGATGCTTGTTTTTGATCCTACAAAAAGGATCAGTGTCACCGAAGCGCTTCAACATCCTTTCATGGCCTCTCTCTATGATCCTAATTGTGACCCTCCAGCCATCATTCCGATTGATCTTGACATTGATGAGGATCTAGGGGAAGATGTGATAAGGGAGTTGATGTGGAGTGAAATGCTTCATTACCATCCTGAATCTGCTATGGGAAGTGCAGAGTTGGGCTCTTGA	1125	0.4187	MGMATPVEPPNGIRIEGKHYFSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLHHENVIALKDIMMPIHRNNFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDIEFIDNPKAKRYIKSLPYSPGTPFSRLYPNAHPLAIDLLAKMLVFDPTKRISVTEALQHPFMASLYDPNCDPPAIIPIDLDIDEDLGEDVIRELMWSEMLHYHPESAMGSAELGS*	375

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mal2g0538	374	ProSiteProfiles	Protein kinase domain profile.	34	321	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mal2g0538	374	ProSitePatterns	MAP kinase signature.	69	172	IPR003527	GO:0004707\|GO:0005524\|GO:0006468
Mal2g0538	374	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	13	368	-	-
Mal2g0538	374	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	13	368	-	-
Mal2g0538	374	Pfam	Protein kinase domain	35	321	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mal2g0538	374	SMART	serkin_6	34	321	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mal2g0538	374	SUPERFAMILY	Protein kinase-like (PK-like)	26	328	IPR011009	-
Mal2g0538	374	CDD	STKc_TEY_MAPK	28	363	-	-
Mal2g0538	374	ProSitePatterns	Protein kinases ATP-binding region signature.	40	64	IPR017441	GO:0005524
Mal2g0538	374	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	156	168	IPR008271	GO:0004672\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g0538	Mal-Chr2	6277925	6279667	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g0538	3	372	MAP Kinase Gene Family	AT1G10210	84.865	0.0	673

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_MAPK	Mal2g0538		Pkinase	2.8e-71	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g0538	K20535		-	gmx:100798863	708.753

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal2g0538	2	6277925	6279667	Mal2g0538	2	6277925	6279667	ECH

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