Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0538 ATGGGAATGGCGACTCCGGTTGAGCCTCCGAACGGGATAAGAATTGAAGGAAAGCATTATTTTTCCATGTGGCAAACCCTGTTTGAGATTGACACCAAATATGTGCCGATTAAGCCGATTGGTCGAGGAGCGTATGGGATTGTTTGTTCTTCTGTCAATAGAGAAACCAATGAGAAAGTTGCAATCAAGAAGATACAGAACGCGTTTGAGAATCGCGTTGATGCTCTTAGAACTTTGCGCGAATTGAAACTTCTTCGACATCTTCACCATGAGAATGTTATTGCTTTGAAAGACATCATGATGCCTATTCATAGGAATAATTTCAAGGATGTTTATCTGGTTTATGAACTCATGGACACCGATTTGCATCAGATTATTAAGTCTTCCCAAGCACTGTCTAATGATCACTGCCAATATTTCCTCTTTCAGTTGCTTCGGGGCTTGAAATATCTACACTCAGCGAACATCCTTCATCGTGACTTGAAACCTGGCAATCTTCTAATTAATGCAAACTGTGACCTAAAAATATGTGATTTTGGGTTAGCACGCACAAACTGCAGCAAGAACCAGTTCATGACGGAGTATGTTGTCACTCGGTGGTATAGGGCACCAGAACTCCTACTTTGCTGTGACAACTACGGGACATCTATTGATGTATGGTCTGTGGGATGCATTTTTGCTGAGCTTCTTGGACGGAAACCTATTTTCCCTGGTTCAGAGTGTCTCAACCAACTAAAACTTATTATCAATATCCTTGGTAGTCAAAGGGAGGAGGATATTGAATTTATTGATAATCCAAAGGCAAAGAGGTACATCAAATCACTTCCATATTCTCCAGGAACTCCCTTTTCCAGACTTTACCCCAATGCACATCCATTGGCAATAGATCTATTGGCAAAGATGCTTGTTTTTGATCCTACAAAAAGGATCAGTGTCACCGAAGCGCTTCAACATCCTTTCATGGCCTCTCTCTATGATCCTAATTGTGACCCTCCAGCCATCATTCCGATTGATCTTGACATTGATGAGGATCTAGGGGAAGATGTGATAAGGGAGTTGATGTGGAGTGAAATGCTTCATTACCATCCTGAATCTGCTATGGGAAGTGCAGAGTTGGGCTCTTGA 1125 0.4187 MGMATPVEPPNGIRIEGKHYFSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLHHENVIALKDIMMPIHRNNFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDIEFIDNPKAKRYIKSLPYSPGTPFSRLYPNAHPLAIDLLAKMLVFDPTKRISVTEALQHPFMASLYDPNCDPPAIIPIDLDIDEDLGEDVIRELMWSEMLHYHPESAMGSAELGS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0538 374 ProSiteProfiles Protein kinase domain profile. 34 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g0538 374 ProSitePatterns MAP kinase signature. 69 172 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mal2g0538 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 368 - -
Mal2g0538 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 368 - -
Mal2g0538 374 Pfam Protein kinase domain 35 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g0538 374 SMART serkin_6 34 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g0538 374 SUPERFAMILY Protein kinase-like (PK-like) 26 328 IPR011009 -
Mal2g0538 374 CDD STKc_TEY_MAPK 28 363 - -
Mal2g0538 374 ProSitePatterns Protein kinases ATP-binding region signature. 40 64 IPR017441 GO:0005524
Mal2g0538 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Mal2g0538 374 Gene3D Phosphorylase Kinase; domain 1 21 355 - -
Mal2g0538 374 Gene3D Transferase(Phosphotransferase) domain 1 118 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0538 Mal-Chr2 6277925 6279667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0538 3 372 MAP Kinase Gene Family AT1G10210 84.865 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mal2g0538 Pkinase 2.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0538 K20535 - gmx:100798863 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0538 2 6277925 6279667 Mal2g0538 2 6277925 6279667 ECH