Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0518 ATGAGTGAGTTGTTTTCTCTAGGTAGAAAAGAATATCAAAAAGAAGGTAATATTAATAGTAACGAGGAGATCTATAACAAAGGGTTAGAGATCATATGGCCACAACAAAGCTTGAACAGTTACAATGCATTTGGAGTGGATCATAGTAGTATCAGAAATTCTGAGTGTAGAATTGGAAGTTTAATTATGAGGAGAAGTGGAGGAGTGAATTGTCAGGATTGTGGAAATCAAGCAAAGAAAGACTGTGTACATCTAAGATGCAGAACTTGTTGTAAGAGTAGAGGGTTTCAGTGTCAAACACATGTTAAGAGTACTTGGGTTCCCGCAGCTAAACGCCGTGAACGACAACAACATCTCTCTGCGTTACCGTTTCGTCGTCGACACACAGATATTAATCAAGGTGCAACCTCTCTTCCTTTCCCTCAGCCACCCATCCCTACCACAGGGTTGGAGTTGGGACAATTCCCACCTGAGGTGAGTTCTCCAGGAGTAACGTTTCGGTGTGTGAGAGTGAGTTCATTGGACGGTCCAGATCATGAGCAGTGCGCGTATCAAACGGCTGTGAACATAGGAGGGCATGTTTTCAAAGGAATTCTCTATGATCAAGGACCACCTTCAAGTCATTACAGTGCTAGTGCACCTATTCATGAGGGTTCTTCTGGTGGTGGTGGTCATCAACCTCAACAACTTGATTTCTTAACTGCTTCGGCTGCAACCACAGCCACAACCACCGGTATCCATTTCGATCCTTCACTTTACTCGGCTCCGCTAAATGCTTTCATGGCTAGTACACAATTTTTCCACTCCCAACATCCTAGCTAA 822 0.4367 MSELFSLGRKEYQKEGNINSNEEIYNKGLEIIWPQQSLNSYNAFGVDHSSIRNSECRIGSLIMRRSGGVNCQDCGNQAKKDCVHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQHLSALPFRRRHTDINQGATSLPFPQPPIPTTGLELGQFPPEVSSPGVTFRCVRVSSLDGPDHEQCAYQTAVNIGGHVFKGILYDQGPPSSHYSASAPIHEGSSGGGGHQPQQLDFLTASAATTATTTGIHFDPSLYSAPLNAFMASTQFFHSQHPS* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0518 273 MobiDBLite consensus disorder prediction 206 229 - -
Mal2g0518 273 PANTHER PROTEIN SHI RELATED SEQUENCE 7 27 269 - -
Mal2g0518 273 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 27 269 IPR007818 GO:0003700|GO:0006355
Mal2g0518 273 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 154 204 IPR006511 -
Mal2g0518 273 Pfam Domain of unknown function (DUF702) 68 204 - -
Mal2g0518 273 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 70 112 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0518 Mal-Chr2 6075313 6076745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0518 1 269 C2H2 Transcription Factor Family AT1G19790 42.330 1.86e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mal2g0518 DUF702 4.6e-52 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0518 - - gmx:100807290 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0518 2 6075313 6076745 Mal7g2600 7 87840945 87841643 ECH
Mal2g0518 2 6075313 6076745 Mal2g0518 2 6075313 6076745 ECH
Mal1g5973 1 137617703 137619185 Mal2g0518 2 6075313 6076745 PCT